Gene SO_3342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3342 
Symbol 
ID1171024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3489167 
End bp3489808 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content47% 
IMG OID637345147 
Producthypothetical protein 
Protein accessionNP_718896 
Protein GI24374853 
COG category[S] Function unknown 
COG ID[COG2860] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAGAAG CACAATTTAT CGGATTATTA TGGCTGATTG GGATTTTGGC CGAGGCGATG 
ACAGGGGCCT TAGCGGCGGG TCGTAAGCAG ATGGATTTAT TCGGTGTGGT GATTATTGGC 
TGCGCTACGG CGATTGGTGG TGGTACCTTA AGAGACATGC TACTCGGAAA TTACCCCTTG 
GTTTGGGTCG AGAATGTTCA TTACCTGATT GCGATTGCAT TTGCGTCTTT GTTAACGGTC 
GCGATTGCGC CGGTTATGCG TTATCTGTCT AAGTTGTTTT TGGCAATCGA TGCCCTTGGG 
CTGGCGGTTT TCTCGATTGT TGGCGCGCAA AAGACTCTGA TGCTCGGTTT TAGCCCTACG 
ATTGCGGTAG TTATGGGGTT AGTTACTGGC GTTTTTGGTG GGGTGATCCG CGATATTCTG 
TGCAACCAAG TGCCTTTAAT TTTTAAGAAA GAACTCTATG CGGTGATTTC GCTCTTTACC 
GCAGGCTTAT ATATCACGCT CAACGCCTAC CAATTGGAGG AGTGGATAAA CCTAGTGATT 
TGTTTAACGC TTGGATTTAG CTTACGAATG CTGGCATTGC GCTATCATTG GTCGATGCCT 
ACCTTTGATT ACCAGTCCAG TGGTGATCAG CATACACACT GA
 
Protein sequence
MQEAQFIGLL WLIGILAEAM TGALAAGRKQ MDLFGVVIIG CATAIGGGTL RDMLLGNYPL 
VWVENVHYLI AIAFASLLTV AIAPVMRYLS KLFLAIDALG LAVFSIVGAQ KTLMLGFSPT 
IAVVMGLVTG VFGGVIRDIL CNQVPLIFKK ELYAVISLFT AGLYITLNAY QLEEWINLVI 
CLTLGFSLRM LALRYHWSMP TFDYQSSGDQ HTH