Gene SO_3341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3341 
Symbol 
ID1171023 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3488537 
End bp3489130 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content43% 
IMG OID637345146 
Productanti-oxidant AhpCTSA family protein 
Protein accessionNP_718895 
Protein GI24374852 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2077] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAAAGT ATGTTTCGTT TCTAGCCGCT GGCTGTGTTT TTAGTTTAAT GCTTCTCAGC 
CCAATGGCGA TTGCCAACGA TAAATCCCAA GTCATGATGG GGGAAAAGAC TGTCACCCTA
GAAGGTAAAT TACCTAAACT TGAGCAAATG GCCCCCAGAT TTAAAGTCGT TGATGACAAG
TTCAACCCTA TCAACTTAAC TGACTTTAAA GGAAAGACCA TTCTTATCAG TGCAGTACCT
AGCTTAGATA CAGGTGTCTG CGCGCTACAA ACTAAACGCT TTAATAGCGA GGTGGGCCAC
TTTTCCGATA ATGTAGTCAT GTTGACCATC AGCACGGATT TACCCTTCGC GCAAAAACGT
TTCTGCAAAG TTGAGAATGT GGAAAATATT AAGGTGTTAT CCGATTCTGT TTGGCGCGAC
TTTGGCGAAA AGTATGGTCT ATTAATTGAA GATTACGGCT TGCTTGCTCG GGCAATCTTC
ATCATCGATG CAGAAGGTAA GCTGAAGTAT CAAGAACTCG TACCTAACAT TACCGAACAC
CCAAACTATG ACGCGGCGCT GGAAGCGTTA AAAACCATTC AAGCACAGCA ATAA
 
Protein sequence
MPKYVSFLAA GCVFSLMLLS PMAIANDKSQ VMMGEKTVTL EGKLPKLEQM APRFKVVDDK 
FNPINLTDFK GKTILISAVP SLDTGVCALQ TKRFNSEVGH FSDNVVMLTI STDLPFAQKR
FCKVENVENI KVLSDSVWRD FGEKYGLLIE DYGLLARAIF IIDAEGKLKY QELVPNITEH
PNYDAALEAL KTIQAQQ