Gene SO_3339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3339 
Symbol 
ID1171021 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3486976 
End bp3487566 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content41% 
IMG OID637345144 
ProductOmpA family protein 
Protein accessionNP_718893 
Protein GI24374850 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAATAT CCGTAAAGCA ATGGATTGAA TTAACCTGTT TAGCACTAAG TTTGAGCCTA 
ATGCTGCCTG CTTATGCTTG GCAGGATACA GACCAAGACG GCGTACCAGA TATTAAAGAT 
GCTTGCCCAA ATACACCCGC AAATACGAGT GTGATGGCTA ATGGTTGTGT TGATGAAGTG 
GAAGTGACTT CTGATAACAT CCAATGCAAT CTCAATGACC CCAGCACCTA TTCTGCCTCT 
GATTGTCATC ATATTGAGAC AGCCATTGTG TATTTTGAGT TTGCCATAGC CGAAGTGGAT 
TTATCGCAGT GGAAAGCATT AGCCTTAGTA AAGTCGTTTT TAGAAGCGAA TACTGAGACT 
AAATTAACCT TAGTGGGACA TACAGATATT GTCGGCACAC CAGAGTTTAA TTATCAGTTA 
TCACTTCAAC GGGCACAAAA TGTGAAACGA ATTTTGGTTG AAGACTATGG ATTCAACCCA 
AATCGCTTTA CCGTTGTCGG TAAAGGTATA TCTGAGCCTG TCGCGGATAA TCGTTCCAGT 
GAAGGTCGCG GATTAAATCG ACGAGTACAA TTTATCGTCA ATAATATTTA G
 
Protein sequence
MKISVKQWIE LTCLALSLSL MLPAYAWQDT DQDGVPDIKD ACPNTPANTS VMANGCVDEV 
EVTSDNIQCN LNDPSTYSAS DCHHIETAIV YFEFAIAEVD LSQWKALALV KSFLEANTET 
KLTLVGHTDI VGTPEFNYQL SLQRAQNVKR ILVEDYGFNP NRFTVVGKGI SEPVADNRSS 
EGRGLNRRVQ FIVNNI