Gene SO_3338 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3338 
SymbolybjU 
ID1171020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3485677 
End bp3486690 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content47% 
IMG OID637345143 
ProductL-allo-threonine aldolase 
Protein accessionNP_718892 
Protein GI24374849 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATT TGCGCAGTGA TACCGTGACC CAGCCAACTG AGGCGATGCG TTTAGCCATG 
TCTAGGGCAG AAGTGGGCGA CGATGTTTAT GGTGATGATC CGACCGTGAA CAGTTTGCAG
GACATGGCCG CCGAGATGTT TGGTTTTGAG AGCGCTCTTT TTACGGCATC GGGCACTCAA
GCCAATTTGC TCGCACTGAT GGCGCATTGC GAGCGTGGGG ATGAATATTT ATGTGGTCAG
CAGGCCCATA ACTACAAATT TGAAGGTGGT GGCGCGGCGG TATTGGGTAG CATTCAACCA
CAACCGTTGA CGAATCAACT GGATGGCACT ATTGCCCTTA CTGATGTTGA AGCAGCCATC
AAGCCCGATG ATATTCATTT TGCCCGCACA CGCTTACTGA GTTTAGAAAA TACTATTGGG
GGGAAAGTGT TGTCGCAGGC CTATCTTGCC AATGCGCAGG CGTTGGCTTT TCAACGTGGT
TTAAAAATTC ATTTAGATGG TGCAAGGGTG GCCAATGCTG CAGTAGCACA AGGTATTGCT
ATTGCTGATA TAGCAGCGCA TTTTGATTCA GTTTCCATTT GTTTATCAAA AGGATTATGT
GCGCCAGTAG GGTCGTTACT CTTAGGGGAT GAACGCCTGA TTAAAAAAGC GACACGTTGG
CGAAAAATGC TTGGTGGCGG TATGCGTCAA GCGGGTATTT TAGCGGCGGC TGGCAAGTTA
GCCTTAACTG AACAAGTTGA AAGACTTGCA GAAGATCATG AAAATGCGGC TTATCTGGCT
CAGCAGTTAA GCCAGTTGGA TGAGTTTGAC ATTGACTTAG CCTCAGTTCA AACCAATATG
GTGTTTGCAA CATTGGCATC CCATGTCGAT GAACAGGCCT TAGTGAAACG CTGTCGTGGC
GAGGGCATTC TGATTAGTCC TGGACGTACC TTACGTTTTG TTACCCATAA AGATGTCTCG
CGTCAGGATA TTGATAAGGT ATTGCAGGTA TTTAAATTAC ATCTGCAGGC GTAA
 
Protein sequence
MIDLRSDTVT QPTEAMRLAM SRAEVGDDVY GDDPTVNSLQ DMAAEMFGFE SALFTASGTQ 
ANLLALMAHC ERGDEYLCGQ QAHNYKFEGG GAAVLGSIQP QPLTNQLDGT IALTDVEAAI
KPDDIHFART RLLSLENTIG GKVLSQAYLA NAQALAFQRG LKIHLDGARV ANAAVAQGIA
IADIAAHFDS VSICLSKGLC APVGSLLLGD ERLIKKATRW RKMLGGGMRQ AGILAAAGKL
ALTEQVERLA EDHENAAYLA QQLSQLDEFD IDLASVQTNM VFATLASHVD EQALVKRCRG
EGILISPGRT LRFVTHKDVS RQDIDKVLQV FKLHLQA