Gene SO_3335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3335 
Symbol 
ID1171017 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3482607 
End bp3483431 
Gene Length825 bp 
Protein Length274 aa 
Translation table11 
GC content46% 
IMG OID637345140 
Producthypothetical protein 
Protein accessionNP_718889 
Protein GI24374846 
COG category[S] Function unknown 
COG ID[COG3228] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCGCCA TTTTAACCAT TCTGCTATTT GGCCTCAGTG CAATGGCTTG GCTGGGGTCC 
AGTCGTTGGC GCAAAACTCG CCATCGAAAC CGGGTATTGG CCAGTCCCTT TCCTAAGGCT
TGGCGAGCAA TACTAAAAAG AAGACTCCCT TTCTTTCACG CATTACCAGC TGATCTGCAA
CTACAACTGA AACGTCACAT TCAAGTGTTT TTGGCTGAAA AGCATTTTGT TGGCTGCGAC
GGTTTACAAA TAACCGATGA AATTAGAGTG ACCATTGCAG CCCAAGCGTG CCTGCTATTG
CTCAATCGCA AAACAGATTT TTACCCCAAA CTAAGACAGA TTTTAGTCTA TCCCGATGCA
TTTATTGTCG ACAGTCAACG ACAGGATCCC GCTGGCTTAA TCAGTGAACA ACGCAATGTA
CTCGCCGGAG AATCCTGGGA GCATGGGCAA GTAATACTAT CATGGAAAAA CACCCTCGAA
GGCGCCGCCA ATCCCCATGA TGGCAATAAT GTCGTTATCC ATGAATTTGC CCATCAACTA
GATCAAGAAG ATGGCTACGC CAATGGCGCC CCGATTTTGC AACGTCGTCA GGATTATCGT
TCTTGGTCCA GCGTATTCAA TCAAGCATTT AATGAATTAG TCCATGATGC TGCTATGGGT
AAGCCATCCC TATTTGATTA CTATGGAGCG ACTAACCCTG CAGAATTTTT TGCGGTGGTG
ACTGAGGTGT TTTTTGAAAA ACCAGCAGCA CTTAATCTCG AGCATCCTGC ACTTTATCGC
GAATTGAGTC ATTTCTATCA AGTCGATCCG ATAAACTGGC GCTAA
 
Protein sequence
MLAILTILLF GLSAMAWLGS SRWRKTRHRN RVLASPFPKA WRAILKRRLP FFHALPADLQ 
LQLKRHIQVF LAEKHFVGCD GLQITDEIRV TIAAQACLLL LNRKTDFYPK LRQILVYPDA
FIVDSQRQDP AGLISEQRNV LAGESWEHGQ VILSWKNTLE GAANPHDGNN VVIHEFAHQL
DQEDGYANGA PILQRRQDYR SWSSVFNQAF NELVHDAAMG KPSLFDYYGA TNPAEFFAVV
TEVFFEKPAA LNLEHPALYR ELSHFYQVDP INWR