Gene SO_3320 details

Gene Information

• Locus tag: SO_3320
• ID: 1171005
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3472674
• End bp: 3473195
• Gene Length: 522 bp
• Protein Length: 173 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637345128
• Product: hypothetical protein
• Protein accession: NP_718874
• Protein GI: 24374831
• COG category: [R] General function prediction only
• COG ID: [COG1741] Pirin-related protein

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGTA TACGTAAAGC CCAAGATCGC GGCCAAGCAA ACTTAGGCTG GTTAAAGAGT 
CAACATACCT TCTCGTTTGC GAGCTACTAC GATCCACAAC ATATGGGTGT GTCATCCTTA 
CGAGTCATAA ACGATGACAG AGTCGCGCCA GGTGCAGGCT TTGAAACCCA TGGCCATAAA 
GACATGGAAA TCATCAGTTA TGTGATTTCG GGCACCATTG CCCACAAGGA TAGCTTTGGC 
AATATCAAGA CCTTACCCGC GGGGGAGTTT CAGTTAATGT CTGCCGGCAA AGGGATTTAT 
CACAGCGAAT TTAATGCATC AAACACTGAG CCACTGCACT TTTTGCAGAT CTGGATCCAA 
CCAGATACCT TAGGCATTGA TGCTGGCTAT CAACAAAAAG CCTTTGCACA AACAAGGGCT 
ATCCATTTAG CGCCACCAGT GTCAATATGT AGTAATGAAA ACTTCATCGT ATTTATTAAA 
AGCTGGCGTC GATTACCCTA CAAATTGGGA CGAATTTGTT GA 

 

Protein sequence

MIRIRKAQDR GQANLGWLKS QHTFSFASYY DPQHMGVSSL RVINDDRVAP GAGFETHGHK 
DMEIISYVIS GTIAHKDSFG NIKTLPAGEF QLMSAGKGIY HSEFNASNTE PLHFLQIWIQ 
PDTLGIDAGY QQKAFAQTRA IHLAPPVSIC SNENFIVFIK SWRRLPYKLG RIC