Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3318 |
Symbol | |
ID | 1171003 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3471164 |
End bp | 3472057 |
Gene Length | 894 bp |
Protein Length | 297 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637345126 |
Product | LysR family transcriptional regulator |
Protein accession | NP_718872 |
Protein GI | 24374829 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTGCCAG CGATAAGTCT TGACGGATTA ATAGTGCTCG ATGCAATTGA TAAGAAAGGT AGTTTTTCGG CAGCGGCTGA ATCCTTGTTC AGGGTGCCGT CGGCGCTGAC CTACACAGTC CAGAAATTAG AGAGCGATTT AGGGGTAAAA TTATTTGAAC GTAAGGGCCA GCGTGCTGAG CTGACCTTAG TTGGCCAACT CGTGCTGCGC CAAGGGCGGG AGATCCTTGC TGCAACCTCA AGGCTTGAAG AGGCCGTCCG GCAACTTGAA ACGGGTTGGG AGTCGACATT AACCTTAGCT ATCGATACTG TAGTGCCGGG TTTACCTCTG TTAAAACTCA TTGCTGAATT TACCGAATTA GGTAAGCAGG TGACCATTAA TATCACTGAG GAATCCTTGG GCGGCGGTTG GGATGCGCTG TATTCGGGCC GCGCCGATAT CGCCGTTGGG GTTACGGGGG AGTTGCCCAA GGGGCAATAT CATTTAGTTG AAATCGGCAT GCTAGAATTT GTATTTGCTC TTGCGCCCAA TCATCCTTTA GCGCAGTTTG ATCATCCCAT TGCGACTGAA GCGTTATTAC AATTTCCCTC CGTCGTTGTG GCTGATAGTT CGACCGCCTT GGCGCAGCGC TCCAGTGGCT TGTTTGATAG CAGGCAAGTG ATCCGCGTGC CCAATATGCA GACCAAGATT AAAGCCCAGC AGCTAGGGTT AGGTGTGGGC TATCTTCCCA AGCATTTGAT AGGCGAAGCT CTCGCAGCAG GGACATTAGT CGCGTGTCAG CTTGAGATTC CAAGGCCTGC ACAAGCTGTG TTTTTGGCGT GGCGCAAGGG AAGCCTGGGT AAAGCGCAGG CGTGGTTTGC CGAGCGTTTA CCCCATTGTA ATTGGTTGTT TTAA
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Protein sequence | MLPAISLDGL IVLDAIDKKG SFSAAAESLF RVPSALTYTV QKLESDLGVK LFERKGQRAE LTLVGQLVLR QGREILAATS RLEEAVRQLE TGWESTLTLA IDTVVPGLPL LKLIAEFTEL GKQVTINITE ESLGGGWDAL YSGRADIAVG VTGELPKGQY HLVEIGMLEF VFALAPNHPL AQFDHPIATE ALLQFPSVVV ADSSTALAQR SSGLFDSRQV IRVPNMQTKI KAQQLGLGVG YLPKHLIGEA LAAGTLVACQ LEIPRPAQAV FLAWRKGSLG KAQAWFAERL PHCNWLF
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