Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3315 |
Symbol | |
ID | 1171000 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3466890 |
End bp | 3468011 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637345123 |
Product | ribosomal RNA large subunit methyltransferase N |
Protein accession | NP_718869 |
Protein GI | 24374826 |
COG category | [R] General function prediction only |
COG ID | [COG0820] Predicted Fe-S-cluster redox enzyme |
TIGRFAM ID | [TIGR00048] radical SAM enzyme, Cfr family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAAA AAAAGATCAA TTTATTAGAC CTTGATCGTA AGGCGATGCG TGCATTATTT GCCGATCTTG GCGAAAAGCC TTTCCGAGCC GATCAACTCA TGAAGTGGAT CTATCATTTC GGTGTCAGTG ACTTCGAAGA GATGACTAAC ATCAACAAAG TGTTACGCCA AAAACTGGCG GCGCGCTGTG AGATTGTTGC CCCCGAAATT TCGGGCTATC AAAAATCCGC CGACGGCACC ATTAAGTTCG CCATCCATGT CGGCGAAGGC CAAGAGGTTG AAACCGTTTA TATTCCTGAA GATGACCGCG CCACGTTATG CGTGTCGTCT CAAGTCGGCT GTGCCCTCGA ATGTACTTTT TGCTCTACCG CACAGCAAGG CTTTAACCGC AACTTAACCG TCTCTGAAAT CGTTGGCCAA ATTTGGCGTG TTTCCCACTT CTTAGGTTTT GCGAAAGAAA CCGGCGAGCG CCCCATCACT AACGTCGTTA TGATGGGAAT GGGTGAGCCT CTTCTTAACC TTGCCAACGT GATCCCAGCA ATGGACATCA TGTTAGACGA TTTTGGTTTT AGCCTGTCAA AGCGTCGCGT AACGCTATCG ACCTCTGGCG TTGTGCCAGC CCTTGATAAA CTGGGTGATG CCCTCGATGT GGCGTTAGCC GTGAGTATCC ACGCGCCAAA CGATGAGCTG CGCGATATTT TGGTTCCCGT TAATAAAAAG TATCCGCTGC AGGAGTTTCT TGCGGGGATC CGCCGTTATA TTGCTAAATC GAATGCTAAC CGTGGCCGCG TAACTGTGGA ATATGTGATG CTCGATCACA TCAACGACAG CACCGAGCAA GCCCATGAAT TAGCACAATT AATGAAGGAT ACGCCTTGTA AGGTAAACCT GATCCCGTTT AACCCATACC CAGGTTCGCC CTATGGCCGT TCATCGAACT CTCGCATCGA CCGTTTTTCT AAAGTATTGA TGGAATACGG TTTGACTGTA ATTGTGCGTA AGACACGTGG AGACGATATT GACGCCGCCT GTGGACAGCT GGCTGGAGAT ATTCGCGATC GAACCAAACG TTTAGCAAAA AAACGCATGC AAGAAAATCA GATTTCGGTC ACAATGAATT AA
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Protein sequence | MSEKKINLLD LDRKAMRALF ADLGEKPFRA DQLMKWIYHF GVSDFEEMTN INKVLRQKLA ARCEIVAPEI SGYQKSADGT IKFAIHVGEG QEVETVYIPE DDRATLCVSS QVGCALECTF CSTAQQGFNR NLTVSEIVGQ IWRVSHFLGF AKETGERPIT NVVMMGMGEP LLNLANVIPA MDIMLDDFGF SLSKRRVTLS TSGVVPALDK LGDALDVALA VSIHAPNDEL RDILVPVNKK YPLQEFLAGI RRYIAKSNAN RGRVTVEYVM LDHINDSTEQ AHELAQLMKD TPCKVNLIPF NPYPGSPYGR SSNSRIDRFS KVLMEYGLTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK KRMQENQISV TMN
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