Gene SO_3315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3315 
Symbol 
ID1171000 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3466890 
End bp3468011 
Gene Length1122 bp 
Protein Length373 aa 
Translation table11 
GC content48% 
IMG OID637345123 
Productribosomal RNA large subunit methyltransferase N 
Protein accessionNP_718869 
Protein GI24374826 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTGAAA AAAAGATCAA TTTATTAGAC CTTGATCGTA AGGCGATGCG TGCATTATTT 
GCCGATCTTG GCGAAAAGCC TTTCCGAGCC GATCAACTCA TGAAGTGGAT CTATCATTTC
GGTGTCAGTG ACTTCGAAGA GATGACTAAC ATCAACAAAG TGTTACGCCA AAAACTGGCG
GCGCGCTGTG AGATTGTTGC CCCCGAAATT TCGGGCTATC AAAAATCCGC CGACGGCACC
ATTAAGTTCG CCATCCATGT CGGCGAAGGC CAAGAGGTTG AAACCGTTTA TATTCCTGAA
GATGACCGCG CCACGTTATG CGTGTCGTCT CAAGTCGGCT GTGCCCTCGA ATGTACTTTT
TGCTCTACCG CACAGCAAGG CTTTAACCGC AACTTAACCG TCTCTGAAAT CGTTGGCCAA
ATTTGGCGTG TTTCCCACTT CTTAGGTTTT GCGAAAGAAA CCGGCGAGCG CCCCATCACT
AACGTCGTTA TGATGGGAAT GGGTGAGCCT CTTCTTAACC TTGCCAACGT GATCCCAGCA
ATGGACATCA TGTTAGACGA TTTTGGTTTT AGCCTGTCAA AGCGTCGCGT AACGCTATCG
ACCTCTGGCG TTGTGCCAGC CCTTGATAAA CTGGGTGATG CCCTCGATGT GGCGTTAGCC
GTGAGTATCC ACGCGCCAAA CGATGAGCTG CGCGATATTT TGGTTCCCGT TAATAAAAAG
TATCCGCTGC AGGAGTTTCT TGCGGGGATC CGCCGTTATA TTGCTAAATC GAATGCTAAC
CGTGGCCGCG TAACTGTGGA ATATGTGATG CTCGATCACA TCAACGACAG CACCGAGCAA
GCCCATGAAT TAGCACAATT AATGAAGGAT ACGCCTTGTA AGGTAAACCT GATCCCGTTT
AACCCATACC CAGGTTCGCC CTATGGCCGT TCATCGAACT CTCGCATCGA CCGTTTTTCT
AAAGTATTGA TGGAATACGG TTTGACTGTA ATTGTGCGTA AGACACGTGG AGACGATATT
GACGCCGCCT GTGGACAGCT GGCTGGAGAT ATTCGCGATC GAACCAAACG TTTAGCAAAA
AAACGCATGC AAGAAAATCA GATTTCGGTC ACAATGAATT AA
 
Protein sequence
MSEKKINLLD LDRKAMRALF ADLGEKPFRA DQLMKWIYHF GVSDFEEMTN INKVLRQKLA 
ARCEIVAPEI SGYQKSADGT IKFAIHVGEG QEVETVYIPE DDRATLCVSS QVGCALECTF
CSTAQQGFNR NLTVSEIVGQ IWRVSHFLGF AKETGERPIT NVVMMGMGEP LLNLANVIPA
MDIMLDDFGF SLSKRRVTLS TSGVVPALDK LGDALDVALA VSIHAPNDEL RDILVPVNKK
YPLQEFLAGI RRYIAKSNAN RGRVTVEYVM LDHINDSTEQ AHELAQLMKD TPCKVNLIPF
NPYPGSPYGR SSNSRIDRFS KVLMEYGLTV IVRKTRGDDI DAACGQLAGD IRDRTKRLAK
KRMQENQISV TMN