| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3311 |
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| Symbol | hisS |
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| ID | 1170996 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3462354 |
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| End bp | 3463631 |
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| Gene Length | 1278 bp |
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| Protein Length | 425 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345119 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | NP_718865 |
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| Protein GI | 24374822 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGCAAAAC AGATCCAAGC GATTCGCGGA ATGAATGACA TTCTGCCAAC TCAAAGTCCT
CTATGGCAAA AAGTGGAAGC GGTATTACGT TCAAGCGTTG CTGCTTACGG TTACAGCGAG
ATCCGCACTC CAATAGTGGA AAATACCGAT CTTTTTAAAC GCTCTATCGG TGAAGTAACT
GATATTGTTG AAAAAGAAAT GTATACCTTC GAAGACCGTA ATGGCGATAG TCTGACGTTG
CGCCCCGAAG GCACCGCCTC GACTGTGCGT GCTGGCAATG AGCATGGTTT GCTGTATAAC
CAAGAACAAC GTTTGTGGTA CATGGGCCCT ATGTTTCGCC ATGAGCGCCC GCAAAAAGGC
CGTTACCGTC AATTCCATCA ATTTGGTGTG GAAATTTATG GTATTGGTAG TGCTGATATC
GACGCTGAAG TGTTGATGTT ATCCGCCCGT CTTTGGGAAA AGCTAGGGAT CACTGAGCAT
GTGACGCTTG AGCTCAATAC CTTAGGCGAT CCTGCCGAGC GCGCCGCTTA CCGTGAAGCG
TTAATTGCCT TCTTAGAACA ACATAAAGAC AAATTAGACG AAGATAGTCA GCGCCGTATG
TACAGTAATC CACTGCGCGT ACTGGACTCG AAAGATCCAC AAGTACAAAG CATCTTAGCC
GATGCGCCTG CGCTGATGGA TTACTTAGGT GAAGAATCTT CACAACATTT TGCACAATTG
CGTGAACTCC TCGACGCTGT TGGCATCCAA TACCGAGTTA ACTCTCGTTT AGTCCGTGGT
TTGGATTACT ATAATCGTAC GGTTTTTGAA TGGGTTACCA ATAGCTTAGG CTCTCAAGGC
ACTGTGCTTG CGGGTGGTCG CTATGATGGT TTAGTCGCGC AGCTGGGTGG TAAAGAAACG
CCTGCGGTGG GTTTTGCGAT GGGATTAGAG CGCATCGTCC TACTACTCGA AACCTTAGCG
CTGACACAGG ATATCCCTGC AGAAGTGGAT GTTTATGTTG CCGCTATGGG GGATAACTGC
CTAGTTGAAG CCATCAAAGT GGCTCAAGAA TTGCGCTCGG CGTTGCCCAC CCTGAGAGTC
ATGAGTCACT GTGGTGGTGG CAATCTGAAG AAACAAATGA AGCGTGCCGA TAAAAGCGGC
GCTCAAGTAG CCTTACTGAT TGGCGAAGAA GAACTCGCCG AAGGTGTGGT TACGGTGAAA
TATTTACGCA ATGACAACGA ACAACAACGG GTCGCTCGAA ATGCATTAAG CGCATTTTTA
GCTGAACTTA CCAAATAA
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| Protein sequence | MAKQIQAIRG MNDILPTQSP LWQKVEAVLR SSVAAYGYSE IRTPIVENTD LFKRSIGEVT
DIVEKEMYTF EDRNGDSLTL RPEGTASTVR AGNEHGLLYN QEQRLWYMGP MFRHERPQKG
RYRQFHQFGV EIYGIGSADI DAEVLMLSAR LWEKLGITEH VTLELNTLGD PAERAAYREA
LIAFLEQHKD KLDEDSQRRM YSNPLRVLDS KDPQVQSILA DAPALMDYLG EESSQHFAQL
RELLDAVGIQ YRVNSRLVRG LDYYNRTVFE WVTNSLGSQG TVLAGGRYDG LVAQLGGKET
PAVGFAMGLE RIVLLLETLA LTQDIPAEVD VYVAAMGDNC LVEAIKVAQE LRSALPTLRV
MSHCGGGNLK KQMKRADKSG AQVALLIGEE ELAEGVVTVK YLRNDNEQQR VARNALSAFL
AELTK
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