| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3309 |
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| Symbol | |
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| ID | 1170994 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3460522 |
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| End bp | 3461709 |
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| Gene Length | 1188 bp |
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| Protein Length | 395 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637345117 |
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| Product | outer membrane protein assembly complex subunit YfgL |
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| Protein accession | NP_718863 |
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| Protein GI | 24374820 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1520] FOG: WD40-like repeat |
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| TIGRFAM ID | [TIGR03300] outer membrane assembly lipoprotein YfgL |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTCTT GGTGCAAGAA CCTGCTAGCC GCTGGGTTAA GCCTAGCTAT GTTATCCGCC
TGTTCTTCTA GCGATGTGGA AGAAGAACCG GTAAGCGAGT TAACTGCGAT TCAGGCAACA
GTGTTTCCTG AAGTAAGTTG GAGCGCCTCT GTAGGTGATG GTGTTGGAGA TTACTATTCT
CGCCTTACAC CTGCAGTTCG TTACGGTAAA ATTTTTGCTG CTGACCGTTA TGGTGCAGTC
ATGGCCTTTG ACGAAGCCTC GGGTGAACAG GTTTGGAGAA AAGATTTTAG TGAAGAGTTT
CGTGATAACG CCTTAGCCAA AAACAAAGGT GCACGCTTAG CTGCAGGTAT CACTGCCGCA
CGCAATAAAC TCTTTATCGG CGGTGAGAGT GGTCTATTGG CTGCACTGAA TGCCGAAGAT
GGCCAAGTGC TATGGCATGT GATTGCGGGT GGTGAATTAT TATCTAAGCC AACCGTGGCT
GACGACGTTG TGGTGGTGAG TACTAGTTCT GGTTCACTTG AAGCCTATAA CGTTGATACA
GGTGCAAAAC TGTGGGTCTA TGACATGCAG CTACCTAATC TGACGCTCCG GGGTACGGGT
TCAGCAGCCT ATGAAGCGGG TGGTTTCTTT ATCGGTACCG CCGATGGCAA AGTGGCTGTT
GTAGTGAAAA ACAATGGTCA AGCCGCATGG GAACAAGCCA TCTATAATCC AACGGGTGGC
AATGAGTTTA CCCGTATGGC TGATGTGGAT ATGACGCCGC TGATCCTTGG CGACAACTTG
TATGCCGTCA GCTATAACGG TAACTTGGTT TCGATGGAGC TGCGTACCGG ACGGATTATT
TGGACTCGTA AGTATTCAAG CTTCAATGAA TTAACTACGG CGGGTTTAAG TTTGTTCTTG
GTTGATGACC ACAGTCGTAT CTACTCGGTT GATAGACGTA ACGGCCTAGA ACTGTGGAGC
AACTCTGAGC TGGTAAATCG CACACTCACT TCACCAGAAG TGTATAAAGA CTATTTAGTC
GTGGGCGATT TTGAAGGTTA TCTGCACTTT ATCGACCGCA GCACCGGCAG TATTGTCGGT
CGTATTCAAG TGGACAGCTC TGGATTATTC AGTCAGCCAA TAGTGGTGGA TGATAAAATC
TACGTGCAAG GCCGCAGCGG AAAGTTAGCT GTTGTAACAC TTCCTTAG
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| Protein sequence | MKSWCKNLLA AGLSLAMLSA CSSSDVEEEP VSELTAIQAT VFPEVSWSAS VGDGVGDYYS
RLTPAVRYGK IFAADRYGAV MAFDEASGEQ VWRKDFSEEF RDNALAKNKG ARLAAGITAA
RNKLFIGGES GLLAALNAED GQVLWHVIAG GELLSKPTVA DDVVVVSTSS GSLEAYNVDT
GAKLWVYDMQ LPNLTLRGTG SAAYEAGGFF IGTADGKVAV VVKNNGQAAW EQAIYNPTGG
NEFTRMADVD MTPLILGDNL YAVSYNGNLV SMELRTGRII WTRKYSSFNE LTTAGLSLFL
VDDHSRIYSV DRRNGLELWS NSELVNRTLT SPEVYKDYLV VGDFEGYLHF IDRSTGSIVG
RIQVDSSGLF SQPIVVDDKI YVQGRSGKLA VVTLP
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