| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3308 |
|---|
| Symbol | engA |
|---|
| ID | 1170993 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3458979 |
|---|
| End bp | 3460442 |
|---|
| Gene Length | 1464 bp |
|---|
| Protein Length | 487 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 637345116 |
|---|
| Product | GTP-binding protein EngA |
|---|
| Protein accession | NP_718862 |
|---|
| Protein GI | 24374819 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1160] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03594] ribosome-associated GTPase EngA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCCCTG TAGTGGCCCT TGTTGGTCGG CCGAACGTCG GTAAATCCAC CTTATTTAAC
CGCCTTACGC GTACGCGTGA TGCGCTGGTT GCCGACTTTC CTGGCCTAAC ACGTGACCGT
AAATATGGTC GAGCATTCCT ATCCGGCTAT GAGTTTATCG TGGTGGATAC CGGCGGTATC
GACGGCACTG AAGAGGGGAT CGAAACTAAG ATGGCCGAGC AGTCCCTTGC CGCTATCGAA
GAAGCCGATG TAGTGTTATT TATGACCGAT GCGCGTGCCG GGTTAACCGC AGCGGATTTG
TCTATCGCCC AGCATCTGCG TAGCCGCCAA AAAACCACCT TTGTGGTTGC TAACAAGATT
GACGGTATTG ACGCCGATTC TGCCTGTGCC GAATTTTGGT CGTTAGGCTT AGGCGAAGTC
TATCAAATGG CTGCTGCCCA AGGTCGCGGC GTGACCAACA TGATCGAGTA TGCCTTAACA
CCTTACGCTG AAGCCATGGG CATTGAGCGC CAAGGTGAAG AGGAAGAGGT CGACGAGCGT
CAGTACACTG AAGAAGAAGC CGAAGCCGAG CAAAAACGTC TGCAGGACTT ACCGATCAAA
CTCGCCATCA TCGGTAAACC TAACGTGGGT AAATCGACCC TGACTAACCG CATCTTAGGT
GAAGAGCGCG TGGTGGTTTA CGACGAGCCA GGCACAACCC GCGACAGTAT TTATATTCCG
ATGGAACGCG ATGGCCGTGA ATACGTGATT ATCGACACTG CGGGGGTGCG TCGTCGCAGT
AAAGTCCATG AAGTGATTGA AAAGTTCTCA GTGATAAAAA CCCTCAAAGC GGTTGAAGAT
GCTAACGTGG TATTGCTTAT CATTGATGCC CGTGAAGGCG TTGCCGAGCA GGATCTCGGC
CTATTAGGAT TTGCCCTAAA CGCAGGCCGC GCGTTAGTGA TTGCCGTTAA CAAGTGGGAT
GGCATCGATC AAGGCATAAA AGATCGTGTT AAGAGTGAAC TTGACCGCCG ATTAGGCTTT
ATCGACTTTG CCCGTATTCA CTTTATTTCG GCGCTGCATG GCACTGGTGT TGGCCATCTG
TTTGAATCGA TTGAAGAAGC TTATGATAGT GCGACTCGCC GCGTAAGTAC CTCAATGTTG
ACCCGCATCA TGCAAATGTC GCAGGATGAC CATCAGCCAC CATTGGTGAA TGGTCGCCGC
GTGAAACTGA AATACGCCCA CGCCGGTGGT TATAACCCAC CAATCGTGGT TATCCACGGT
AACCAAGTCA GCAAGTTGCC TGATTCGTAC AAGCGTTACA TGATGAACTA CTTCCGCCGT
TCATTAAAAG TGGTCGGTAC GCCAATTCAA CTGCGTTTCC AAGAGGGTGA TAACCCGTTT
GAAAACAAAG TGGAAAAGCT GACTATGAGC CAAGAGCGTC GCCGTAAACG CGCCCTGAGC
CATATTAAAG ATAGAAAAAA ATAA
|
|---|
| Protein sequence | MIPVVALVGR PNVGKSTLFN RLTRTRDALV ADFPGLTRDR KYGRAFLSGY EFIVVDTGGI
DGTEEGIETK MAEQSLAAIE EADVVLFMTD ARAGLTAADL SIAQHLRSRQ KTTFVVANKI
DGIDADSACA EFWSLGLGEV YQMAAAQGRG VTNMIEYALT PYAEAMGIER QGEEEEVDER
QYTEEEAEAE QKRLQDLPIK LAIIGKPNVG KSTLTNRILG EERVVVYDEP GTTRDSIYIP
MERDGREYVI IDTAGVRRRS KVHEVIEKFS VIKTLKAVED ANVVLLIIDA REGVAEQDLG
LLGFALNAGR ALVIAVNKWD GIDQGIKDRV KSELDRRLGF IDFARIHFIS ALHGTGVGHL
FESIEEAYDS ATRRVSTSML TRIMQMSQDD HQPPLVNGRR VKLKYAHAGG YNPPIVVIHG
NQVSKLPDSY KRYMMNYFRR SLKVVGTPIQ LRFQEGDNPF ENKVEKLTMS QERRRKRALS
HIKDRKK
|
|---|
| |