Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3298 |
Symbol | |
ID | 1170985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3442492 |
End bp | 3443616 |
Gene Length | 1125 bp |
Protein Length | 374 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637345108 |
Product | hypothetical protein |
Protein accession | NP_718852 |
Protein GI | 24374809 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAACTA AATTATTATG TAAGTTTATG TCTGCAATTG TTGGATTATC TGCTTTTAGT GTTTATGCAG ATAATCCAGA TGAAGGAATT AAATTTGGCG GTTCAGTTAG AGCGAACTAT GCTTATAGAG ATTATGACCA AGCTTCAAAA GATAAGGGGG GAGACTTTTA TTTTGATGTT GCAACTTTAA CGTTAAATGG AAAAATAGGG GACTGGGGGG TATCTGCAGA TTATAGACTG TCATCAAAAA CGAATTTCAT TAAACATGGT TATGGTTTCT ATGATGTAAA TGATGATCTG CAAGTTCAAG TTGGTATTAA TAAGGTTCCT TTTGGTAATC GAGAGTTAAT ATCAAATAGT TGGTGGTTTG GTTTGCCATA TTACTTAGGG TTTGAGGATG ACTCTGACGT AGGTGTTAAA GTGGTTTATG AAAACCAAGG TTGGCATACA GATGTAGCCT TTTATAAAAG TGCTGAATAT GGTGCGACCG AGAACAAGCG TTATTCGACC GATTTGTATA CCGGTACCAT CAATGGCACT GAGTATCACA ATGAAGAGAC TAACCAGTTA AATGTGCGCC AAACTTATAC AACAGAATAC GAAGGCGGCT CGACTACCTT TGGTGGCTCT GTGCAGTATG GCCAAATCTA CAACAGCGAG ACGGGCAACA ATGGCGATCG CTATGCCGTA GCATTGCATT TAGACAGCAG CTACAAAGGC TGGAATTTAC AAATGCAAGC CATGCAATAT GAATACGATG CTGCAGATGC TATCGACTCT AATAAAATTG GCGTGTCAGT AGTAAGCTGG CAGTATGAAA TTGCTTCTAA GGGCCAAGCC TATAACATCA ACATTGCCAA AACCGTGAAC ACAGATTGGG GTAGCATTAA GTTCTACAAC GACTTTGGTT TAATGACGCC AGATGTTGAT GATGATAGCT ACGATAACAG TATGCAAAAC GTCACTGGTA TGGCGATTTC TGCAGGTCCT ACCTACACAA TGATCGACTT TATTATGGGT AAAAATATGA CCTTCTCTAC CGCCAATAAT GATCATATAG GTTTACCTGA AGTGGGTGAT GATTGGGATA AAAGAGTTAA TATAAACTTT GGCTTCTATT TTTAG
|
Protein sequence | MKTKLLCKFM SAIVGLSAFS VYADNPDEGI KFGGSVRANY AYRDYDQASK DKGGDFYFDV ATLTLNGKIG DWGVSADYRL SSKTNFIKHG YGFYDVNDDL QVQVGINKVP FGNRELISNS WWFGLPYYLG FEDDSDVGVK VVYENQGWHT DVAFYKSAEY GATENKRYST DLYTGTINGT EYHNEETNQL NVRQTYTTEY EGGSTTFGGS VQYGQIYNSE TGNNGDRYAV ALHLDSSYKG WNLQMQAMQY EYDAADAIDS NKIGVSVVSW QYEIASKGQA YNINIAKTVN TDWGSIKFYN DFGLMTPDVD DDSYDNSMQN VTGMAISAGP TYTMIDFIMG KNMTFSTANN DHIGLPEVGD DWDKRVNINF GFYF
|
| |