| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3294 |
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| Symbol | xseA |
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| ID | 1170982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3438958 |
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| End bp | 3440295 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637345105 |
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| Product | exodeoxyribonuclease VII large subunit |
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| Protein accession | NP_718848 |
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| Protein GI | 24374805 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1570] Exonuclease VII, large subunit |
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| TIGRFAM ID | [TIGR00237] exodeoxyribonuclease VII, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAGTCC CTAAAAATAA TATTTATACC GTCTCACGCC TCAATGGTGA AGTCAGACAA
ATTCTTGAGG GACAACTGGG TAAGATCTGG CTAAATGGGG AAATTTCCAA CTTTTCCACC
CCCAGTTCAG GCCATTGGTA TTTAACCCTT AAGGATCATT TTTCACAAAT TCGCTGCGCT
ATGTTTAAGG GGCGCAACCA AAGTGTTAGC TTTAAACCCG TGAATGGCCA GCAGGTGATC
GTAAAAGGTG CAATTAGCGT TTACGAGCCG CGGGGCGACT ATCAATTATT AATTGAATCA
ATGCTTCCGG CTGGAGACGG CTTACTGGCG CAACAATTTG AAGCGTTGAA AATGAAGCTC
GCCGCGCTGG GATTATTTGC CGCCGATACT AAACGCGCAC TACCCAAAAA TATCCAACGC
ATTGGGGTTA TTACCTCACC CACAGGTGCC GCTATTCGCG ATGTATTACA TGTGCTTGCA
CGGCGCGACC CATCGATTGA AGTGATTATT TACCCGACAC AAGTACAGGG CGAAAACGCG
GATATTAATA TCTGCCAAGC AATCAATATC GCCAATCAAC GGCTTGAGGT GGATGTATTA
CTGCTCACCC GCGGCGGTGG CTCGTTAGAA GATTTATGGT GTTTTAACAG CGAAGCCCTC
GCCCATACCA TTTATAACAG TGCGTTACCC ATAGTGAGTG CCGTGGGTCA TGAAGTCGAT
ACCACGATCA GTGACTATGT GGCAGATGTA CGAGCTCCCA CCCCCTCCGC TGGTGCAGAA
CTGCTCTCAC AGGACAGTGA CAATAAAAGC CAACGTTTAG CCACAGTGCT TGCCCGCCTC
AAACAGAGCG CAAGCCACTA TCAACTCAAG CAGGAGAGAC GTTTAAGTTT ACTTGAGCAC
AGGTTGCAAC GCTTAGATCC TAAGCGCACC TTGCAGCAGT TTGAGCAGCG TTTCGATGAG
ATGCAATTAC GGCTCGAAGC CGCGCTTACC AACAAGCTGC ATGGCTTAAG CCGCCGTCAG
CAGCAACTGG CAAGTCGCCT AGAGCAACAA TCGCCGAAAC ATAAGCTCGC GCTCGAAGCT
AATCGTTTGA GTTATTTAGC GACGCGGTTG CAGGATGCCA TGCAGGACAA ACTCAGCCAC
AGCGGGCAGC GGATTAAATA TGTAGCCCAT CAGTTAGAGA CTGTCAGTCC ATTGGCGACA
TTGAGCCGCG GTTACAGCAT CACCACTGAC GTAAACGGTG CTGTTATCAC ATCTGCAAGT
CAAATCAGTC TTGGTGATAC TATTACAACT CAACTGTCCA ACGAGCGTCT AATGTCTACC
GTTACTCGTC TCCCATAA
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| Protein sequence | MQVPKNNIYT VSRLNGEVRQ ILEGQLGKIW LNGEISNFST PSSGHWYLTL KDHFSQIRCA
MFKGRNQSVS FKPVNGQQVI VKGAISVYEP RGDYQLLIES MLPAGDGLLA QQFEALKMKL
AALGLFAADT KRALPKNIQR IGVITSPTGA AIRDVLHVLA RRDPSIEVII YPTQVQGENA
DINICQAINI ANQRLEVDVL LLTRGGGSLE DLWCFNSEAL AHTIYNSALP IVSAVGHEVD
TTISDYVADV RAPTPSAGAE LLSQDSDNKS QRLATVLARL KQSASHYQLK QERRLSLLEH
RLQRLDPKRT LQQFEQRFDE MQLRLEAALT NKLHGLSRRQ QQLASRLEQQ SPKHKLALEA
NRLSYLATRL QDAMQDKLSH SGQRIKYVAH QLETVSPLAT LSRGYSITTD VNGAVITSAS
QISLGDTITT QLSNERLMST VTRLP
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