| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3279 |
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| Symbol | |
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| ID | 1170972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3418954 |
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| End bp | 3422034 |
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| Gene Length | 3081 bp |
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| Protein Length | 1026 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637345095 |
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| Product | AcrB/AcrD/AcrF family protein |
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| Protein accession | NP_718833 |
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| Protein GI | 24374790 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTAAAG CCTTTGTCGA AAATGGCCGC CTAGTCAGCC TAGTGATCGC CTTGCTTTTA
GTTGCCGGAT TTGGGGCTAT GTCCAGCTTG CCACGCACAG AAGATCCGCA TATCACCAAC
CGCTTTGCCT CGGTGATAAC CCCGTATCCA GGCGCATCCG CCGAGCGGGT AGAGGCATTA
GTCACTGAAG TATTAGAAAA CCAGTTACGC CGCCTTGAGG AAATAAAGCT GATTCAATCG
ACCTCAAGAC CCGGTATTTC TGTGATTCAA TTAGAACTCA AAGACACGGT AACAGATACC
GATCCTGTGT GGTCTAGGGC GCGGGATCTG CTTGCTGACG CGAGAAACAG CCTACCCGAT
GATATACAAA CACCCACCTT AGATGACCAA GTAGGCTACG CCTACACCGC CATTTTAAGT
CTAGTGTGGA ACGATAGCAG TCAACCTCGG GTTGATATGC TTAATCGCTA CGCCAAAGAA
TTACAAAGCA GACTCAGACT CTTAGCCGGG ACGGACTTCG TCAAACTCTA TGGCGCGCCT
GAAGAAGAAA TTCTCGTGCA ACTTGATGGT TATAAGATGA GTCAGTTGCA GCTGACTCCG
GGGACTATCG CCAACATTCT GCGCAGCGCT GACAGCAAAA TTGCGGCGGG TGAGATTAAT
AACAATCATT TTCGTGCATT AGTCGAAGTA TCTGGTGAAC TCGATTCCCA AAGCCGTATT
CGCCAAGTGC CACTTAAAGT GGATAGCGAT GGGCAGATCA TTCGCTTGGG CGATATTGCG
ACAATCAGCC GTCAACCTAA AAGCCCTGCA GACAGTATCG GCCTCGTCGA TGGCGAGCAA
GGTGTTTTTG TCGCGGCACG TATGCTCAAC AATACTCGCG TCGATATCTG GCAGGGACAA
GTCAAGCAGT TGGTCGATGA ATTCAATATC GATCTACCCG CAAATATCAA AGTGGAATGG
TTATTAGAGC AAAATAGTTA CACCAGTGAA CGGCTTGGTG GACTCGTTAT CAACCTCATA
CAAGGGTTTG TGATTATTCT CAGCGTGTTA CTGCTGACCC TAGGGCTGAG AAATGCCGTC
ATTGTTGCCA TATCCCTCCC CTTAACCGCC CTGTTTACCT TAGCCTGCAT GAAATACATC
GGCTTACCCA TTCATCAAAT GTCAGTCACC GGTTTAGTGG TAGCCCTTGG GATCATGGTG
GACAATGCCA TTGTGATTGT CGATGCCATC GCCCAGCGCC GCCAACAGGG CATGAGTCGC
CTAAACGCAG TGACTGAGGC CTTACATCAC CTATGGTTAC CCTTAGCCGG CTCAACGATT
ACCACCATTT TAGCCTTTGC TCCCATCGTA CTAATGCCGG GCGCAACAGG AGAGTTTGTC
GGTGGCATTG CGATGGCGGT AATGTTTGCA CTGTTTGGTT CCTATTTAAT TTCCCATACT
TTGATTGCGG GACTCGCGGG ACGTTTTAGC CTTGAAGGTA AAAATCCTAT TTGGTATCAG
CATGGGATCA ATTTGCCTTT AGTAAGTGGT TACTTTCAAG CAAGCCTAAG GTTTGCCTTA
AACCGCCCAC GGCTCAGCGC CATATTAATC GGCACCATTC CGCTGTTAGG TTTTTATGCA
TCAGGGAAAA TGACCGAACA ATTCTTCCCA CCATCGGATC GGGATATGTT CCAAATTGAG
CTATATCTCG CGCCCCACGT CAGTCTAGAA AATACGCTAA GCCAAGTGTA TTTGATGGAT
AAGCAATTGC ATCAAATCGA AGGCATTACC CAAGTCGATT GGGTTGTCGG GGGAAATACG
CCTTCGTTTT ATTACAATTT AACCCAGCGC CAACAAGGCG CTACCAACTA TGCACAGGCA
ATGATAAAAA CCATCGATTT TGAGCGTGCC AACGCGCTTA TACCTGTACT GCAACAACGT
TTCGATAAAG CCTTTCCTGA AGCTCAGGTG CTGGTGCGCA AATTAGAGCA AGGCCCCCCC
TTTAATGCAC CAGTCGAGTT GATGATATTC GGCCCTGATC TGGAAACATT ACGTACACTC
GGTGATGAAA TCCGTCATAT TTTGGCCGCG ACACCCGATG TGATCCACAC CCGCGCAACC
TTAAGTGCAG GGTCACCAAA GGTATTGCTG CAGGTGAATG AAGATGCGAG TTTAATCAGC
GGACTAAGCC TGACGAATAT CGCCAGACAA GTCCAAATGT CAACGACCGG AGTGATAGGT
GGCAGCGTGT TAGAACAAAC CGAGTCATTA CCTATACGCG TGCGTTTAGG CGAGAATAGC
CGTGAGCAAG CGAGCCGCTT ATCGGAAATT CAACTGATGA CACCTTCTGG CACCGCCGTC
CCGTTATCTG CACTTTCACA TAATGAGGTA CAGGTAAGCC GTGGGGCGAT ACCAAGACGC
AATGGCCAAC GGGTCAATAC CATCGAAGCC TATATCGTCA GTGGTGTATT ACCCGCCCAA
GTCTTAAATG ATGTTAAAGA TAAAGTGGCC GCAATCAAAC TGCCGGCAGG CTATCGGATT
GAAATTGGCG GAGAAAGCGC TAAACGCAAT GAAGCGATAG GTAACCTACT GTCAAATATC
ATTTTAGTGG TCACCTTATT ACTAGCAACC GTGGTGTTAT CCTTTAATTC CTTTAGGCTC
ACGGCCATTA TTTTACTCAG CGCATTACAG TCGGCAGGAC TGGGGCTACT TGCAGTATTT
GTGTTTGGTT ATCCCTTTGG CTTCCCCGTG ATCATTGCGC TGCTAGGTTT AATGGGCCTG
GCAATCAACG CTGCCATTGT GATCTTAGCT GAGCTTGAAG AGTTACCAGC GGCAAGAATG
GGCGATAAGG CGGTCATTGT TAGCACAGTG AGCAGTTGCG GCCGTCATAT CAGCTCAACC
ACGATCACCA CTGTAGGAGG TTTTATTCCG CTTATTATTG CAGGCGGTGG CTTCTGGCCA
CCCTTTGCGA TCGCTATCGC GGGCGGCACC TTGCTGACAA CGCTGTTATC ACTCGTTTGG
GTGCCCACCA TGTATCTACT ACTGATGACA AAGCGCCATT CGACACAAGC AGCGACCTTG
TCGCCTCAAA TGGCATCATG A
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| Protein sequence | MIKAFVENGR LVSLVIALLL VAGFGAMSSL PRTEDPHITN RFASVITPYP GASAERVEAL
VTEVLENQLR RLEEIKLIQS TSRPGISVIQ LELKDTVTDT DPVWSRARDL LADARNSLPD
DIQTPTLDDQ VGYAYTAILS LVWNDSSQPR VDMLNRYAKE LQSRLRLLAG TDFVKLYGAP
EEEILVQLDG YKMSQLQLTP GTIANILRSA DSKIAAGEIN NNHFRALVEV SGELDSQSRI
RQVPLKVDSD GQIIRLGDIA TISRQPKSPA DSIGLVDGEQ GVFVAARMLN NTRVDIWQGQ
VKQLVDEFNI DLPANIKVEW LLEQNSYTSE RLGGLVINLI QGFVIILSVL LLTLGLRNAV
IVAISLPLTA LFTLACMKYI GLPIHQMSVT GLVVALGIMV DNAIVIVDAI AQRRQQGMSR
LNAVTEALHH LWLPLAGSTI TTILAFAPIV LMPGATGEFV GGIAMAVMFA LFGSYLISHT
LIAGLAGRFS LEGKNPIWYQ HGINLPLVSG YFQASLRFAL NRPRLSAILI GTIPLLGFYA
SGKMTEQFFP PSDRDMFQIE LYLAPHVSLE NTLSQVYLMD KQLHQIEGIT QVDWVVGGNT
PSFYYNLTQR QQGATNYAQA MIKTIDFERA NALIPVLQQR FDKAFPEAQV LVRKLEQGPP
FNAPVELMIF GPDLETLRTL GDEIRHILAA TPDVIHTRAT LSAGSPKVLL QVNEDASLIS
GLSLTNIARQ VQMSTTGVIG GSVLEQTESL PIRVRLGENS REQASRLSEI QLMTPSGTAV
PLSALSHNEV QVSRGAIPRR NGQRVNTIEA YIVSGVLPAQ VLNDVKDKVA AIKLPAGYRI
EIGGESAKRN EAIGNLLSNI ILVVTLLLAT VVLSFNSFRL TAIILLSALQ SAGLGLLAVF
VFGYPFGFPV IIALLGLMGL AINAAIVILA ELEELPAARM GDKAVIVSTV SSCGRHISST
TITTVGGFIP LIIAGGGFWP PFAIAIAGGT LLTTLLSLVW VPTMYLLLMT KRHSTQAATL
SPQMAS
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