Gene SO_3277 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3277 
Symbol 
ID1170970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3417070 
End bp3417636 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content46% 
IMG OID637345093 
ProductTetR family transcriptional regulator 
Protein accessionNP_718831 
Protein GI24374788 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTGGTAG CGGCGATTGA TTTGTTTTGC CGTCAAGGTT TTCCCCATAC CAGTATGGAT 
GAAGTCGCTA AATTAGCGGG CGTTTCTAAG CAAACCGTTT ATTCCCACTA TGGCAGTAAA 
GATGAGCTGT TTGTGGCGGC GATTGAATCT AAATGCGTGG GTCACAATTT AAATGATGAC 
TTGCTGAGTG ATCCAAGCCA ACCCGAAGCC ACCATTACCG AGTTTGCCTT GCAATTTGGC 
GAGATGATTG TCAGCCCTGA GGCGATAACG GTGTTTAAAG CCTGTGTGGC ACAATCGGAA 
AGCCATCCTG AAGTCTCACG CTTATTTTTT GAGGCTGGAC CTAAGCATAT TGTGGGGTTA 
ATGGCCGATT ATTTAGTCGC GGTAGAAGCA CTTGGACGCT ATCGATTTAC TCAGCCACAC 
CACTGTGCAG TACGTTTGTG TTTGATGCTA TTTGGTGAGC TAAAACTAAG GTTAGAGCTT 
GGGCTGGAGG CAGATAACTT AGTGGGAGAA CGTGAACAGT ATATTCGCGG TTGTGCAGAA 
ATGTTCCTAA AAGCTTATCG TGTTTAA
 
Protein sequence
MLVAAIDLFC RQGFPHTSMD EVAKLAGVSK QTVYSHYGSK DELFVAAIES KCVGHNLNDD 
LLSDPSQPEA TITEFALQFG EMIVSPEAIT VFKACVAQSE SHPEVSRLFF EAGPKHIVGL 
MADYLVAVEA LGRYRFTQPH HCAVRLCLML FGELKLRLEL GLEADNLVGE REQYIRGCAE 
MFLKAYRV