Gene SO_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3271 
Symbol 
ID1170964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3409875 
End bp3410870 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content46% 
IMG OID637345087 
Productpolysaccharide biosynthesis protein 
Protein accessionNP_718825 
Protein GI24374782 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1086] Predicted nucleoside-diphosphate sugar epimerases 
TIGRFAM ID[TIGR03589] UDP-N-acetylglucosamine 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGATA ATAAAACAAT TTTGATTACG GGTGGCACGG GGTCATTTGG ACAAAAATAC 
ACCAAAACCA TTCTCGAACG CTATAAACCG AAGCGCTTGA TCATTTTTTC CCGAGATGAA 
TTAAAACAGT ATGAGATGCA GCAAGTGTTT AACGCGCCAT GTATGCGTTA TTTTATCGGT 
GATGTGCGCG ATGGGGAACG CCTGAAACAA GCCTTTAAAG ATGTGGATTT TGTGATCCAT 
GCCGCTGCAC TTAAACAGGT TCCCGCTGCC GAATACAACC CGATGGAATG CATAAAAACC 
AATATCCATG GGGCCGAAAA TGTGATCCGG GCCGCCATCA GTAATAATGT TAAGAAGGTC 
ATCGCCCTCT CAACAGACAA AGCCGCGAGT CCTATTAACC TATATGGTGC GACTAAGTTG 
GCCTCCGATA AGCTGTTTGT CGCCGCCAAT AACGTGGTGG GAGATGGCAA AACCCGATTC 
GCCGCAGTTC GCTATGGTAA TGTCGTGGGG TCACGTGGTT CAGTCGTGCC ATTCTTTAAA 
CAACTGATTG CCAATGGTGC GACTTCGCTG CCCATTACGC ATCCCGATAT GACACGTTTT 
TGGATTACTC TTCAAGATGG TGTTGATTTT GTCTTAAAAA ACTTCTCCCG TATGCAGGGC 
GGAGAGATCT TCGTACCCAA AATTCCTTCC ATACGCATCA CTGATCTTGC CGCAGCCTAT 
GGGCCGAGTT TGGAGCAGCA GATTGTAGGT ATTCGTCCCG GGGAAAAAAT GCATGAGGTC 
ATGTGTCCAG GGGATGACTC CCATCATACG ATTGAATTTG ATGACCACTT TGTCATCACG 
CCAAGTATTC GTTTTTTTGG GCGTGAAACA GACTTTTGTA CCAATGCCTT AGGAGAGAAG 
GGGCAGACTG TGCCGATGGG ATTTGAATAT AATTCTGGCA CTAATCCACA TTTTTTAACA 
CAGGCTGAAA TTCTTAAACT GGATACCGTT GCATGA
 
Protein sequence
MFDNKTILIT GGTGSFGQKY TKTILERYKP KRLIIFSRDE LKQYEMQQVF NAPCMRYFIG 
DVRDGERLKQ AFKDVDFVIH AAALKQVPAA EYNPMECIKT NIHGAENVIR AAISNNVKKV 
IALSTDKAAS PINLYGATKL ASDKLFVAAN NVVGDGKTRF AAVRYGNVVG SRGSVVPFFK 
QLIANGATSL PITHPDMTRF WITLQDGVDF VLKNFSRMQG GEIFVPKIPS IRITDLAAAY 
GPSLEQQIVG IRPGEKMHEV MCPGDDSHHT IEFDDHFVIT PSIRFFGRET DFCTNALGEK 
GQTVPMGFEY NSGTNPHFLT QAEILKLDTV A