Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3267 |
Symbol | |
ID | 1170960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3403961 |
End bp | 3404872 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637345083 |
Product | hypothetical protein |
Protein accession | NP_718821 |
Protein GI | 24374778 |
COG category | [R] General function prediction only |
COG ID | [COG4106] Trans-aconitate methyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATCAAA AAACATCCGA ACAACATATG GGACATCTCG TTGACGAGAT CAATGGTTTC CAAGTGATTG AATGTCAAAT GTGTGGATTT AAACACATCC ATCCTCTGCC AACGTTAGCC GAGCTTGAAA AAATCTATCG GCATGAATAC TACACTCTAG ATAAACCTCT ATTTCTCCAA GAAACAGAAG AGGATAAAAA TTGGTGGAAC ACAGTTTATT CCGATCGCTA TGATACTTTT GAAGAGTTTT TACCTACTAC GGCTCGACGT ATATTAGATG TAGGTTCTGG CCCAGGTTAT TTTGTGAGTT ATGGCCAGAA GCGGGGTTGG AAATCGATTG GGATTGAACC ATCTGCACAA GCCTGTGAAC ACGCAAGAGG TTTAGGGGCA GAAGTCGTTG AGAATTTCTT TAATCATAAG ACCGCGACTT TACTGGGGAA ATTTGATGCA ATTCATGCAA ATGCCGTTCT TGAGCACATC CCTAATCCAA GAGAAATGGT ATCACTTTTT AGAGAATCTC TAGTACAAGG TGGGATATTA TGTGTTGTTG TTCCTAATGA TTACAACCCA TTTCAAGAAA CGCTGCGAAC GTATGAGGGA TATCGTCCCT GGTGGGTGGC CCCACCGCAT CATCTTAATT ATTTTAGCTT TGAGACCTTA GGAAACTTAC TGACCTCTGC TGGATTTGAG GTTGTGCTGC AGGAGACGAC TTTTCCAATC GATATGTTTT TACTGATGGG GGATAATTAT GTTGATTCTC CAGCCCTTGG ACGTACTTGC CATAAAAAGC GGATGAGATT TGATACTCAA CTATTACACT CTGGTAACAA TCAGGTTAAG CGAAAGTTTT ATCAGGCACT TGCTTCCGCA GGAATGGGGC GAGAAGTTGT CCTTTTTGCA AAGAAAATCT AG
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Protein sequence | MHQKTSEQHM GHLVDEINGF QVIECQMCGF KHIHPLPTLA ELEKIYRHEY YTLDKPLFLQ ETEEDKNWWN TVYSDRYDTF EEFLPTTARR ILDVGSGPGY FVSYGQKRGW KSIGIEPSAQ ACEHARGLGA EVVENFFNHK TATLLGKFDA IHANAVLEHI PNPREMVSLF RESLVQGGIL CVVVPNDYNP FQETLRTYEG YRPWWVAPPH HLNYFSFETL GNLLTSAGFE VVLQETTFPI DMFLLMGDNY VDSPALGRTC HKKRMRFDTQ LLHSGNNQVK RKFYQALASA GMGREVVLFA KKI
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