Gene SO_3265 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3265 
Symbol 
ID1170958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3401476 
End bp3402714 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content45% 
IMG OID637345081 
Producthypothetical protein 
Protein accessionNP_718819 
Protein GI24374776 
COG category[I] Lipid transport and metabolism 
COG ID[COG0439] Biotin carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGCATA AAAATAAACA CTTACTGATC ATTGGTGCAG GCGTAGAAGC CTGTGAAGGT 
ATCCGCATTG CCAAGGAAAT GGGGCTTAAA CTTGTCATTG CTGATGGCAA TCCCTCAGCC
CCAGGACTGG CCATGGCAGA TTGGCCAATT ATTGCCAGTA CCTACGATGG TCAAGCCATA
TTAGCTGAAG TTAAAAAACG CCAAACACAG GGCGTAAAAA TTGATGGTGC GATCGCCATG
TGTGCAGATG TACCTTTAAG TGTAGCTATC GTCAGTAATG ACTTGGGATT ACCAGGCCTG
TCACTTGAGT CAGCCTTTTG GGTTTCTGAT AAATTGGCAA TGAAAAAGAG GCTGCAAGCA
GAGGGGATTC CTATTCCACG CTTTGCGGAT GTATCTGATA AGTCAGTCTT ACTTAAACAA
GCCATTAAGA TAGGTTTACC ACTGATTATT AAACCCGTTG ATAGCCGTGG CGCACGTGGG
GTTCAACTGA TAGAGATAGC CTCAGAACTT GATAGTGCAT GGGAATTGGC AGCCAAAGAA
TCCCCCACTT CAAGGGTCAT GCTGGAAGAA TATCTCGAGG GTCCACAGTT CAGTACCGAA
ACCTTGGTCG ATCGTGGACG CTACTATACC CTCGGTTTTG CCGACCGTAA CTACGAGTGG
CTCCCTCGAA CGAAGCCTTT TATCATTGAA AATGGCGGCG ATGCTCCTAC GGGCGTTAGT
GCAAACATCA AAGCTGAGGT TATTGCCACT GTTGAACGAG CAGCGGCGGC ACTTGGGATC
AACCAAGGCG TAGCCAAGGG AGATATGGTC TATACGGCTC AAGGCGCCAA AGTGATTGAA
ATTGCAGGGA GACTCTCAGG CGGGTTCTTT TCAACTGTCC AAATACCTCT TGCAACAGGG
GTCAACTTCA TTGAAAAGGC TATAAAACTA GCCTTAGGAG AGCAGTTAAG CGATGAAGAT
GTTTCAATCA AGCAACAGCG CGCAGTGGCT ATACGTTACC TTGATTTACC TTCAGGTAAA
GTGAGTCATA TTGAAGGAGT TTCAGAGGCA AGCAGCGTAC CTGGGATTGA AATGTTAAAA
ATATTCATTG AACCGGGAAG TATTATTTAT CCACTTGCCA ATCATACACA AAGAACTGGT
TTTGCAATCG CCACAGCTGA TGATAAAGCT ATGGCAATTA CGAGAGCTCA GACTGCACTA
TCAAAAATCA AAGTGGTTTA CGAAGCAACA AATAAATAA
 
Protein sequence
MTHKNKHLLI IGAGVEACEG IRIAKEMGLK LVIADGNPSA PGLAMADWPI IASTYDGQAI 
LAEVKKRQTQ GVKIDGAIAM CADVPLSVAI VSNDLGLPGL SLESAFWVSD KLAMKKRLQA
EGIPIPRFAD VSDKSVLLKQ AIKIGLPLII KPVDSRGARG VQLIEIASEL DSAWELAAKE
SPTSRVMLEE YLEGPQFSTE TLVDRGRYYT LGFADRNYEW LPRTKPFIIE NGGDAPTGVS
ANIKAEVIAT VERAAAALGI NQGVAKGDMV YTAQGAKVIE IAGRLSGGFF STVQIPLATG
VNFIEKAIKL ALGEQLSDED VSIKQQRAVA IRYLDLPSGK VSHIEGVSEA SSVPGIEMLK
IFIEPGSIIY PLANHTQRTG FAIATADDKA MAITRAQTAL SKIKVVYEAT NK