Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3265 |
Symbol | |
ID | 1170958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3401476 |
End bp | 3402714 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637345081 |
Product | hypothetical protein |
Protein accession | NP_718819 |
Protein GI | 24374776 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0439] Biotin carboxylase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGCATA AAAATAAACA CTTACTGATC ATTGGTGCAG GCGTAGAAGC CTGTGAAGGT ATCCGCATTG CCAAGGAAAT GGGGCTTAAA CTTGTCATTG CTGATGGCAA TCCCTCAGCC CCAGGACTGG CCATGGCAGA TTGGCCAATT ATTGCCAGTA CCTACGATGG TCAAGCCATA TTAGCTGAAG TTAAAAAACG CCAAACACAG GGCGTAAAAA TTGATGGTGC GATCGCCATG TGTGCAGATG TACCTTTAAG TGTAGCTATC GTCAGTAATG ACTTGGGATT ACCAGGCCTG TCACTTGAGT CAGCCTTTTG GGTTTCTGAT AAATTGGCAA TGAAAAAGAG GCTGCAAGCA GAGGGGATTC CTATTCCACG CTTTGCGGAT GTATCTGATA AGTCAGTCTT ACTTAAACAA GCCATTAAGA TAGGTTTACC ACTGATTATT AAACCCGTTG ATAGCCGTGG CGCACGTGGG GTTCAACTGA TAGAGATAGC CTCAGAACTT GATAGTGCAT GGGAATTGGC AGCCAAAGAA TCCCCCACTT CAAGGGTCAT GCTGGAAGAA TATCTCGAGG GTCCACAGTT CAGTACCGAA ACCTTGGTCG ATCGTGGACG CTACTATACC CTCGGTTTTG CCGACCGTAA CTACGAGTGG CTCCCTCGAA CGAAGCCTTT TATCATTGAA AATGGCGGCG ATGCTCCTAC GGGCGTTAGT GCAAACATCA AAGCTGAGGT TATTGCCACT GTTGAACGAG CAGCGGCGGC ACTTGGGATC AACCAAGGCG TAGCCAAGGG AGATATGGTC TATACGGCTC AAGGCGCCAA AGTGATTGAA ATTGCAGGGA GACTCTCAGG CGGGTTCTTT TCAACTGTCC AAATACCTCT TGCAACAGGG GTCAACTTCA TTGAAAAGGC TATAAAACTA GCCTTAGGAG AGCAGTTAAG CGATGAAGAT GTTTCAATCA AGCAACAGCG CGCAGTGGCT ATACGTTACC TTGATTTACC TTCAGGTAAA GTGAGTCATA TTGAAGGAGT TTCAGAGGCA AGCAGCGTAC CTGGGATTGA AATGTTAAAA ATATTCATTG AACCGGGAAG TATTATTTAT CCACTTGCCA ATCATACACA AAGAACTGGT TTTGCAATCG CCACAGCTGA TGATAAAGCT ATGGCAATTA CGAGAGCTCA GACTGCACTA TCAAAAATCA AAGTGGTTTA CGAAGCAACA AATAAATAA
|
Protein sequence | MTHKNKHLLI IGAGVEACEG IRIAKEMGLK LVIADGNPSA PGLAMADWPI IASTYDGQAI LAEVKKRQTQ GVKIDGAIAM CADVPLSVAI VSNDLGLPGL SLESAFWVSD KLAMKKRLQA EGIPIPRFAD VSDKSVLLKQ AIKIGLPLII KPVDSRGARG VQLIEIASEL DSAWELAAKE SPTSRVMLEE YLEGPQFSTE TLVDRGRYYT LGFADRNYEW LPRTKPFIIE NGGDAPTGVS ANIKAEVIAT VERAAAALGI NQGVAKGDMV YTAQGAKVIE IAGRLSGGFF STVQIPLATG VNFIEKAIKL ALGEQLSDED VSIKQQRAVA IRYLDLPSGK VSHIEGVSEA SSVPGIEMLK IFIEPGSIIY PLANHTQRTG FAIATADDKA MAITRAQTAL SKIKVVYEAT NK
|
| |