| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3264 |
|---|
| Symbol | |
|---|
| ID | 1170957 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 3400292 |
|---|
| End bp | 3401479 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637345080 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | NP_718818 |
|---|
| Protein GI | 24374775 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGAA ATTGTTTTTT ATGCGCAGCC AAAACCGACA ATGTTTTTAG CTCAACCTGG
ATGTTGCCGG GTCTTGCACC AACAGAAATC GGCTTTTCAA TCTGCCCTAA GTGCGGTTCC
GTATGTCAAA GTCCATCAGT TAGCTACGAT GATATGATGA CTATTTATAG TTCAATCGCA
GTGTATACCA ACCCAGGTCG CCAAGGGCTA CCCAGTAGCG CAAAAATTCG CGATTTAGAT
GAACAAATCC AATTTATTAA GCGGGGTATT GGTCATTTGC CTAAGTCTGC AATGCAGATT
GGCAGCTCTG ATGGTTACAC CCTCTCACGA TTTCGCCAAG CGGGAGTTGA ACTTGTTATG
GGCGTGGAGC CGGGAAGTAC TTCAATCGAG ATTGCCAAAC GCCTTTATAA TATTGATTGT
ATTCATGGAA CAGCTGAAGA TTTTGAGACA GACAAAGATT TTGAGCTGAT CTTGCTAACC
CATGTGTTGG AGCATATCTA CGAGCCACAA GTGACCCTCG ATAAATGCCG TAAAATCCAA
AATACACCGG GTGAAAAATT TATCTATGTA GAAGTCCCCT TAATGGCTAC CGCTGCAAGT
TTGTGTCCAG GATTTTTGAC CTTTGAGCAT GTTAACTATT ACACCAAAGA AAACCTGATC
TGCAGCCTAA CGCAGGCAGG TTATTGGCCC GTTTCTGTGG TGGAACACTT TAACAGCAAC
CTCTCCCCTA TAATAGGTAT ACTGGCCAGC ACACGTGAGC AGCACCACTA TGATGTGATG
AAGATGGACG TCCAGCTAAA CCGTAAAAGA CTAAGTGAAT ACCGTCAAAA AGAGCTTAGT
TATTGGCAAA ACTGTGTTGA CTGTATAAAG GTGTCATTAC AACAAAGCCA GCGGATTTTC
CTCTGGGGTG CAGGAATACA CACCTGTCAA CTGCTCGCTA ACACTGATCT GCTTGACCAC
AGCAGGATTT TTGGCTTGAC GGACACTTCA TCTCTGAAGT GGGGCTTAAG GCAGGGTGAA
TGGATTTGCC AAGATCCACA ACAAATCGAC TGGCAAGTTG GAGATACCGT ATTAATCTCG
TCTTATGCCT CTGAAAAGGA AATCTTTGAT GCTTTATATT GGCTACGAGA CAAAGGCGTA
AATACATTAC GGCTGCATAA TGTTGACGAT ACTAGAGCAA TCGTATGA
|
|---|
| Protein sequence | MIRNCFLCAA KTDNVFSSTW MLPGLAPTEI GFSICPKCGS VCQSPSVSYD DMMTIYSSIA
VYTNPGRQGL PSSAKIRDLD EQIQFIKRGI GHLPKSAMQI GSSDGYTLSR FRQAGVELVM
GVEPGSTSIE IAKRLYNIDC IHGTAEDFET DKDFELILLT HVLEHIYEPQ VTLDKCRKIQ
NTPGEKFIYV EVPLMATAAS LCPGFLTFEH VNYYTKENLI CSLTQAGYWP VSVVEHFNSN
LSPIIGILAS TREQHHYDVM KMDVQLNRKR LSEYRQKELS YWQNCVDCIK VSLQQSQRIF
LWGAGIHTCQ LLANTDLLDH SRIFGLTDTS SLKWGLRQGE WICQDPQQID WQVGDTVLIS
SYASEKEIFD ALYWLRDKGV NTLRLHNVDD TRAIV
|
|---|
| |