Gene SO_3239.3 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3239.3 
Symbol 
ID1170934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3379758 
End bp3380918 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content46% 
IMG OID637345056 
Productflagellar hook-associated protein 
Protein accessionNP_783519 
Protein GI28275264 
COG category[N] Cell motility 
COG ID[COG1256] Flagellar hook-associated protein 
TIGRFAM ID[TIGR02492] flagellar hook-associated protein FlgK 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTATCG ATCTTTTAAA TATTGCCCGT ACAGGGGTGC TCGCTTCCCA GTCGCAACTG 
GGGGTGACCA GTAATAACAT CGCCAACGCT AATACCGTGG GATATCACAG ACAAGTGGCG 
ACGCAAACCA CCTTAGATTC CCAACGTCTT GGCAGTAGCT TTTATGGGAC TGGTACTTAT 
GTCTCTGACG TCAAACGTAT TTATAACGAC TATGCTGCGC GTGAGCTGCG TATTGGCCAA 
ACGACTCTGA GTGCGGCAGA GGCCAGCTAT GGAAAGCTAA GTGAGCTTGA CCAAATTTTC 
TCCCAAATCG GTAAAGTGGT ACCACAGAGC TTGACCGATT TGTTTGCTGG CCTCAACAGC 
TTGGCGGATT TACCTGCAGA TTTAGGTATT CGTAGCTCAA CCTTAAACGA TGCCAAACAA 
TTGGCGAATA GTTTGAACCA GATGCAGTCG ACCTTGAACG GGCAGCTCAA TCAAACCAAT 
GATCAAATCA CGGGGATGAC TAAGCGCATT AATGAAATCA GCACTGAGCT TGCTAATCTC 
AATCTTGAAT TGATGAAATC ACCTAATCAA GATCCCATCT TATTAGACAA ACAAGACGCG 
TTAGTACAAG AGCTGAGTCA GTATGCGCAG GTCAATGTGA TCCCCTTAGA AAATGGCGCC 
AAGAGCATCA TGTTAGGCGG TTCTATCATG TTGGTCTCTG GGGAAGTTGC TATGTCAATG 
AGTACGGCAA CAGGTGATCC TTTCCCAAAT GAATTGCAGT TGATGTCTTC CATTGGCTCA 
CAGAGTGTGA AGGCTGATCC TAGCAAGTTA GGCGGTCAGT TGGGCGCGTT ATTTGAATAC 
CGTGACCAGA CCTTAGTGCC TGCAAGCTTA GAACTTGATC AATTGGCCTT AGGCGTGGCC 
GACAGCTTTA ACAAACTGCA GGCGCAAGGA TTTGATCTTA ATGGTCAAGT TGGCGCAAAT 
ATGTTCAAAG ATATCAACGA TCCATTGATG TCCTTAGGCC GGGTTGGTGG TTTTACAGAT 
AATACTGGCA ACGCGACTTT AGGCGTTAAT ATCGACGATA CCAGTGCCTT AACGGGTGGA 
TCATATGAGT TATCTTTTAC TGCACCTTCG ACCTATGAAC TGCGAGATAC GCAACGGGCG 
CGATTACTCC GCTTACCTTA A
 
Protein sequence
MAIDLLNIAR TGVLASQSQL GVTSNNIANA NTVGYHRQVA TQTTLDSQRL GSSFYGTGTY 
VSDVKRIYND YAARELRIGQ TTLSAAEASY GKLSELDQIF SQIGKVVPQS LTDLFAGLNS 
LADLPADLGI RSSTLNDAKQ LANSLNQMQS TLNGQLNQTN DQITGMTKRI NEISTELANL 
NLELMKSPNQ DPILLDKQDA LVQELSQYAQ VNVIPLENGA KSIMLGGSIM LVSGEVAMSM 
STATGDPFPN ELQLMSSIGS QSVKADPSKL GGQLGALFEY RDQTLVPASL ELDQLALGVA 
DSFNKLQAQG FDLNGQVGAN MFKDINDPLM SLGRVGGFTD NTGNATLGVN IDDTSALTGG 
SYELSFTAPS TYELRDTQRA RLLRLP