Gene SO_3239 details

Gene Information

• Locus tag: SO_3239
• Symbol: flgL
• ID: 1170931
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 3377772
• End bp: 3378983
• Gene Length: 1212 bp
• Protein Length: 403 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637345054
• Product: flagellar hook-associated protein FlgL
• Protein accession: NP_718794
• Protein GI: 24374751
• COG category: [N] Cell motility
• COG ID: [COG1344] Flagellin and related hook-associated proteins
• TIGRFAM ID: [TIGR02550] flagellar hook-associated protein 3

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCTCTG GAGATCGGTT TTCAATACGC CCAACCGCAG GTGCCGCGAA TGGCATTGAA 
GTGGTGATGA CAGATCCTAA AGGTATTGCA GCCGCAGCAC CAAAAATTAC CGCAGATACC 
GCGAACTCAG GTAACACTCA AGTTAAGCTC ACGCAAATTA CTGATCGTAA TGCGGCGAAT 
TTTCCGGTAA AGGGAGGCGA GTTGACGATT CAGTTAAATA CAACTGCCGT GCCGCCGACA 
TTTGAAGCCT TTGATGCAAC AGGCGCATCC CTTGGTGCGC CCACCGCTAT ACGCCGCCAA 
GCATCAGTGC CTTTGGTTTT ACCTTTGAAG TCGAGAGTAG CGCTGCAGCT GCGGGTGACA 
AATTTACCTT CGACTTATCC TTTGCCGAAG GGGATAACAC CAATGCAGTT GCGATGGCAA 
AACTGA 

 

Protein sequence

MRLSTAQLFN QSITSVLQKQ TATSKVLEQL SSGKKVNTSG DDPVAALGID NLNQRNALVD 
QFMKNIDYAN NRLAVTESKL GSAEDLTGSI REQLMRAVNG TLSDSERQMI ADEMKDSLKE 
LLSLANSKDE SGNYLFSGFS TDKQPFAFDN STPPKIVYSG DSGVRDSLVQ SGVAIGTNIP 
GDQAFMKAPN GLGDYSVNYL ASQQGDFKVQ TAKIADQATY VADTYTFNFS DNGAGGVNLQ 
VLDSANNPVA NVTNFDATTP VSFNGIEVKI DGKPSAGDSF SMEPQSEVSI FDTISNAIAL 
IEDPNVANSP QGKAQLAQIL NNIDSGVNQM SSARSVAGNN LKTVERYKDT HTEEKVVNTS 
ALSLLEDLDY ASAITEFEKQ QLALNAVSNV FSKVGSVSLF DFI