| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3238 |
|---|
| Symbol | |
|---|
| ID | 1170930 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3376855 |
|---|
| End bp | 3377676 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637345053 |
|---|
| Product | flagellin |
|---|
| Protein accession | NP_718793 |
|---|
| Protein GI | 24374750 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1344] Flagellin and related hook-associated proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTA CAGTTAATAC TAACGTGACT TCGATGAAGG CACAGAAAAA TTTAAATACC
TCAAATAGTG GTTTATCCAC CTCGATGGAA CGTCTATCCA GTGGCTTGCG CATTAACAGT
GCTAAAGATG ACGCAGCAGG CTTAGCCATT TCTAACCGCT TAAATAGTCA GGTTCGTGGT
TTGGAAGTCG GTATGCGTAA CGCTAACGAT GCTATCTCTA TCGCCCAGAT TGCTGAAGGT
GCGATGCAAG AACAGACTAA CATGTTACAA CGTATGCGTG ACTTGACGAT TCAGTCTGAA
AACGGTGCCA ACAGTACTGC TGACTTGGTT TCTATAAAAG CTGAAATGGA TCAACTTGCA
ACAGAGATTG ACAGTATTGG TAATAGTACG GCTTTTGGTA ATACTAAATT GCTTACAGGT
ACCTTTTCTG CTGGTAAGGT ATTCCAAGTG GGTCACCAAG AAGGTGAAGA TATTAAGGTT
ACGGTAAAAG CCAGTAATAA AACATCTTTA TCAGTAGGTG CGTTGAATAA CGCTACGTCA
GCAAACAGAG CTTCTTCATT AGCAAAAATT GATGCAGCCA TTAAAACAAT TGATAGCCAA
CGTGCTGATT TGGGTGCCGT GCAAAACCGC TTAGCACATA ATATCAGCAA TAGTGCGAAT
ACTCAGGCAA ACGTTGCTGA TGCGAAGAGC CGTATTGTCG ATGTGGATTT TGCGAAAGAA
ACGTCAGCAA TGACTAAATA TCAAGTTTTA CAACAAACGG GTTCTGCAAT GCTCGCCCAA
GCGAACCAAC TTCCGCAGGT TGCTTTATCA CTATTGGGCT AA
|
|---|
| Protein sequence | MAITVNTNVT SMKAQKNLNT SNSGLSTSME RLSSGLRINS AKDDAAGLAI SNRLNSQVRG
LEVGMRNAND AISIAQIAEG AMQEQTNMLQ RMRDLTIQSE NGANSTADLV SIKAEMDQLA
TEIDSIGNST AFGNTKLLTG TFSAGKVFQV GHQEGEDIKV TVKASNKTSL SVGALNNATS
ANRASSLAKI DAAIKTIDSQ RADLGAVQNR LAHNISNSAN TQANVADAKS RIVDVDFAKE
TSAMTKYQVL QQTGSAMLAQ ANQLPQVALS LLG
|
|---|
| |