Gene SO_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3237 
Symbol 
ID1170929 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3375781 
End bp3376599 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content44% 
IMG OID637345052 
Productflagellin 
Protein accessionNP_718792 
Protein GI24374749 
COG category[N] Cell motility 
COG ID[COG1344] Flagellin and related hook-associated proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATTA CAGTTAACAC TAACGTCACA TCTTTAAAAG CACAGAAAAA CTTAAATACT 
TCCGCTAGCG ATTTGGCCAC TTCGATGGAA CGTTTATCCA GTGGTCTGCG TATTAACAGC
GCAAAAGATG ACGCAGCGGG GCTAGCTATT TCTAACCGCT TAAATAGCCA AGTTCGCGGC
TTAGAAGTCG GTATGCGTAA CGCCAACGAT GCGATCTCGA TTGCACAGAT TGCTGAAGGC
GCGATGCAAG AACAAACTAA CATGCTACAA CGTATGCGTG ATTTAACCGT TCAGTCTGAA
AACGGTGCCA ACAGCTCTGC TGACTTAAGC GCACTAAAAG CTGAAATGGA TCAACTTGCC
AACGAAATCG ATGAAATTGG TAAAACTACT GCATTCGGTA CAACTAAGCT TTTAGCGGGT
GGTTTCTCTG CTGGTAAGAA TTTCCAAGTT GGCGCACAAG ACGGCGAAGA TATTAAAGTA
ACTGTAAAAG CCAGTAACAA ATCTTCTTTA TCTGTCGGTT CCTTGGGAAA TACGACATCA
GCTGCCCGAG CATCATCTTT AAAGAAAATC GACGCAGCAA TCAAAACTAT TGACGCGCAA
CGTGCGGATT TAGGTGCTAT CCAAAACCGT TTAGCCCATA ACATCAGTAA CAGTGCTAAC
ACACAAGCAA ACGTTGCCGA TGCGAAGAGC CGTATTGTGG ACGTTGACTT TGCAAAAGAA
ACATCGCAAA TGACTAAGAA CCAAGTGTTG CAACAAACAG GTTCTGCAAT GCTGGCGCAA
GCTAACCAAT TACCTCAAGT GGCCTTATCA CTGCTTTAA
 
Protein sequence
MAITVNTNVT SLKAQKNLNT SASDLATSME RLSSGLRINS AKDDAAGLAI SNRLNSQVRG 
LEVGMRNAND AISIAQIAEG AMQEQTNMLQ RMRDLTVQSE NGANSSADLS ALKAEMDQLA
NEIDEIGKTT AFGTTKLLAG GFSAGKNFQV GAQDGEDIKV TVKASNKSSL SVGSLGNTTS
AARASSLKKI DAAIKTIDAQ RADLGAIQNR LAHNISNSAN TQANVADAKS RIVDVDFAKE
TSQMTKNQVL QQTGSAMLAQ ANQLPQVALS LL