Gene SO_3224 details

Gene Information

• Locus tag: SO_3224
• Symbol: fliJ
• ID: 1170916
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 3362833
• End bp: 3363276
• Gene Length: 444 bp
• Protein Length: 147 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 637345039
• Product: flagellar protein FliJ
• Protein accession: NP_718779
• Protein GI: 24374736
• COG category: [N] Cell motility; [O] Posttranslational modification, protein turnover, chaperones; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG2882] Flagellar biosynthesis chaperone
• TIGRFAM ID: [TIGR02473] flagellar export protein FliJ

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGAATA CCGATCCCCT ATTACTCGTA TTAAAGTTAG CCCTCGACGC AGAGGAGCAA 
GCTGCACTGT TGCTAAAGTC AGCGCAACTT GAGTGCCAAA AACGTCAAAA TCAGCTTGAT 
GCGCTAAATA ACTATCGCTT GGATTATATG AAGCAGATGC AGTCTCAGCA GGGGCAGGCC 
ATCAGTGCGA GTCATTATCA TCAATTCCAT CGTTTTATTC GGCAAATCGA TGAGGCCATT 
GCTCAGCAAC AGCGTGTAGT CGCCGACGGT GAAAAGCAGA AAAACTATCG TCAGCACTAT 
TGGCTTGAGA AACAAAAAAA ACGTAAGGCA GTGGAGTTAC TCCTCGATAA TAAAGAGAAA 
AAGCGCCAAG CGATTGAGCT GAAAAAAGAG CAAAAGATGA CGGATGAATT TGCCTCGCAA 
CAGTTTTACC GCCGTAATAA GTAA 

 

Protein sequence

MANTDPLLLV LKLALDAEEQ AALLLKSAQL ECQKRQNQLD ALNNYRLDYM KQMQSQQGQA 
ISASHYHQFH RFIRQIDEAI AQQQRVVADG EKQKNYRQHY WLEKQKKRKA VELLLDNKEK 
KRQAIELKKE QKMTDEFASQ QFYRRNK