Gene SO_3221 details

Gene Information

• Locus tag: SO_3221
• Symbol: fliM
• ID: 1170913
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 3359428
• End bp: 3360459
• Gene Length: 1032 bp
• Protein Length: 343 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637345036
• Product: flagellar motor switch protein FliM
• Protein accession: NP_718776
• Protein GI: 24374733
• COG category: [N] Cell motility
• COG ID: [COG1868] Flagellar motor switch protein
• TIGRFAM ID: [TIGR01397] flagellar motor switch protein FliM

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGTGATT TATTAAGCCA AGACGAAATT GATGCGCTCT TACACGGGGT CGATGACGTC 
GAAGAGGACA ATGAGCTTGA TGCCGTTGGG CAGGAAGCTC GCTCCTACGA CTTTTCCTCC 
CAAGATCGTA TTGTGCGTGG TCGTATGCCC ACGCTTGAAA TTGTGAATGA GCGTTTTGCC 
CGTCATCTGC GGATCAGTAT GTTCAATATG ATGCGTCGTG CGGCCGAAGT GTCGATCAAC 
GGCGTGCAAA TGCTTAAGTT TGGTGAGTAC GTACATACCC TTTTCGTCCC AACTAGTCTC 
AACATGGTGC GTTTCCACCC GTTAAAAGGC ACTGCGCTCA TCACGATGGA AGCACGCTTA 
GTGTTTATTC TGGTGGATAA CTTTTTTGGT GGTGATGGCC GTTTTCATGC CAAAATTGAA 
GGGCGGGAAT TTACCCCGAC CGAGCGTCGC ATTGTACAGT TGTTGCTTAA AATTATCTTT 
GAAGACTATA AAGATGCTTG GGCACCTGTA ATGGATGTGG AGTTTGATTA TCTCGACTCC 
GAAGTTAACC CCGCGATGGC CAACATTGTC AGCCCAACCG AAGTGGTTGT AATTAACTCC 
TTCCATATTG AAGTCGATGG CGGTGGTGGT GACTTCCACA TCACTATGCC GTATTCGATG 
ATCGAACCTA TCCGCGAATT GCTCGATGCT GGTGTCCAGA GCGATAAACA AGATACGGAT 
ATGCGTTGGT CACAGGCGCT GCACGACGAG ATTATGGACG TAAAAGTAGG CTTCGATGCC 
ACAGTGGTTG AGCATGAACT CACTCTCAAA GATGTGATGA ACTTTAAAGC CGGGGATATT 
ATTCCTATCG AGTTACCTGA GTACATTATG ATGAGAATCG AGGACTTACC AACTTACCGC 
TGTAAAATGG GGCGCTCTCG CGATAATCTA GCACTTAAAA TTTACGAAAA AATCCCACGT 
CCTGAGACGG TCAAATCCGA ACTGCAATTA GTGACGCGTA AAGGCAAAGC CAGAGATATA 
TCAGAATTAT AA 

 

Protein sequence

MSDLLSQDEI DALLHGVDDV EEDNELDAVG QEARSYDFSS QDRIVRGRMP TLEIVNERFA 
RHLRISMFNM MRRAAEVSIN GVQMLKFGEY VHTLFVPTSL NMVRFHPLKG TALITMEARL 
VFILVDNFFG GDGRFHAKIE GREFTPTERR IVQLLLKIIF EDYKDAWAPV MDVEFDYLDS 
EVNPAMANIV SPTEVVVINS FHIEVDGGGG DFHITMPYSM IEPIRELLDA GVQSDKQDTD 
MRWSQALHDE IMDVKVGFDA TVVEHELTLK DVMNFKAGDI IPIELPEYIM MRIEDLPTYR 
CKMGRSRDNL ALKIYEKIPR PETVKSELQL VTRKGKARDI SEL