Gene SO_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3218 
SymbolfliP 
ID1170910 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3357856 
End bp3358599 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content44% 
IMG OID637345033 
Productflagellar biosynthesis protein FliP 
Protein accessionNP_718773 
Protein GI24374730 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1338] Flagellar biosynthesis pathway, component FliP 
TIGRFAM ID[TIGR01103] flagellar biosynthetic protein FliP 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTACA TACTCACTTT TATTGGGCTT AGTACACTGT TGTTTGTTAC ATCGGCAGGG 
GCGGCTGATG GTGTATTACC GGCTGTTACG GTAAAAACCG CTGCGGATGG CTCAACCGAA
TACTCAGTGA CTATGCAGAT ATTACTGCTG ATGACCTCGC TGAGTTTTAT ACCCGCCATG
GTCATTATGT TGACGTCCTT TACCCGCATC ATTGTCGTGC TCTCCATTCT GCGCCAAGCC
ATTGGTTTAC AACAGACACC TTCTAACCAA GTGTTAATCG GTATGAGTCT GTTTATGACC
TTTTTCATCA TGGCGCCCGT GTTCGACAAA ATTTATGACC AAGGGGTAAA ACCCTATATT
GATGAACAAC TCACTTTGCA ACAGGCCTTC GATAAGGGTA AAGAGCCATT ACGGGCATTT
ATGTTGGGGC AAGTGCGTAC CACAGATCTC AAAACCTTTA TCGATATCTC TGGGTACCAG
AATATTAATT CACCCGAAGA AGCACCAATG AGTGTGTTAG TGCCTGCATT TATCACCAGT
GAGCTCAAAA CGGCTTTTCA AATTGGTTTT ATGTTATTCG TGCCTTTTTT AGTGCTGGAT
TTAGTGGTGG CCAGTATCTT AATGGCCATG GGTATGATGA TGCTCTCCCC TATGATTGTG
TCATTACCCT TCAAGATCAT GTTGTTTGTG CTTGTTGATG GTTGGGGACT TGTTATGGGC
ACCTTAGCCA ATAGCTTTGG TTAG
 
Protein sequence
MKYILTFIGL STLLFVTSAG AADGVLPAVT VKTAADGSTE YSVTMQILLL MTSLSFIPAM 
VIMLTSFTRI IVVLSILRQA IGLQQTPSNQ VLIGMSLFMT FFIMAPVFDK IYDQGVKPYI
DEQLTLQQAF DKGKEPLRAF MLGQVRTTDL KTFIDISGYQ NINSPEEAPM SVLVPAFITS
ELKTAFQIGF MLFVPFLVLD LVVASILMAM GMMMLSPMIV SLPFKIMLFV LVDGWGLVMG
TLANSFG