Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3218 |
Symbol | fliP |
ID | 1170910 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3357856 |
End bp | 3358599 |
Gene Length | 744 bp |
Protein Length | 247 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637345033 |
Product | flagellar biosynthesis protein FliP |
Protein accession | NP_718773 |
Protein GI | 24374730 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
TIGRFAM ID | [TIGR01103] flagellar biosynthetic protein FliP |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGTACA TACTCACTTT TATTGGGCTT AGTACACTGT TGTTTGTTAC ATCGGCAGGG GCGGCTGATG GTGTATTACC GGCTGTTACG GTAAAAACCG CTGCGGATGG CTCAACCGAA TACTCAGTGA CTATGCAGAT ATTACTGCTG ATGACCTCGC TGAGTTTTAT ACCCGCCATG GTCATTATGT TGACGTCCTT TACCCGCATC ATTGTCGTGC TCTCCATTCT GCGCCAAGCC ATTGGTTTAC AACAGACACC TTCTAACCAA GTGTTAATCG GTATGAGTCT GTTTATGACC TTTTTCATCA TGGCGCCCGT GTTCGACAAA ATTTATGACC AAGGGGTAAA ACCCTATATT GATGAACAAC TCACTTTGCA ACAGGCCTTC GATAAGGGTA AAGAGCCATT ACGGGCATTT ATGTTGGGGC AAGTGCGTAC CACAGATCTC AAAACCTTTA TCGATATCTC TGGGTACCAG AATATTAATT CACCCGAAGA AGCACCAATG AGTGTGTTAG TGCCTGCATT TATCACCAGT GAGCTCAAAA CGGCTTTTCA AATTGGTTTT ATGTTATTCG TGCCTTTTTT AGTGCTGGAT TTAGTGGTGG CCAGTATCTT AATGGCCATG GGTATGATGA TGCTCTCCCC TATGATTGTG TCATTACCCT TCAAGATCAT GTTGTTTGTG CTTGTTGATG GTTGGGGACT TGTTATGGGC ACCTTAGCCA ATAGCTTTGG TTAG
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Protein sequence | MKYILTFIGL STLLFVTSAG AADGVLPAVT VKTAADGSTE YSVTMQILLL MTSLSFIPAM VIMLTSFTRI IVVLSILRQA IGLQQTPSNQ VLIGMSLFMT FFIMAPVFDK IYDQGVKPYI DEQLTLQQAF DKGKEPLRAF MLGQVRTTDL KTFIDISGYQ NINSPEEAPM SVLVPAFITS ELKTAFQIGF MLFVPFLVLD LVVASILMAM GMMMLSPMIV SLPFKIMLFV LVDGWGLVMG TLANSFG
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