Gene SO_3215 details

Gene Information

• Locus tag: SO_3215
• Symbol: flhB
• ID: 1170907
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: -
• Start bp: 3355612
• End bp: 3356742
• Gene Length: 1131 bp
• Protein Length: 376 aa
• Translation table: 11
• GC content: 47%
• IMG OID: 637345030
• Product: flagellar biosynthesis protein FlhB
• Protein accession: NP_718770
• Protein GI: 24374727
• COG category: [N] Cell motility; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG1377] Flagellar biosynthesis pathway, component FlhB
• TIGRFAM ID: [TIGR00328] flagellar biosynthetic protein FlhB

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTGAAG AAAGTAGCGG CGAACGCAGT GAGGAACCCA CAGGGAGGCG CCTTGATCAG 
GCGCGCGAAA AAGGTCAGGT TGCCCGTTCC AAGGAATTGG GTACTGCCAC AGTTCTGCTT 
TCGGCAGCGA CTGGCTTGTA TATGCTTGGC CCTGGGATTG CGAAAGCACT TTCTAATGTC 
TTCGAGCGCG TATTTACTAT GGACCGCGCG GCAATTTTTG ATACTAACCA GATGTTTAAT 
GTTTGGGGTG TTGTTGGCAG CGAAATAGGT TGGCCGTTGC TGAAAATTAT GTTGCTGATC 
GTGGTTGTGG CATTTATCGG TAACGTGTCC CTTGGTGGGA TGAATTTTTC GACCCAAGCC 
ATGATGCCCA AGGCCAGTAA AATGAGTCCG ATTGCGGGCT TTAAGCGTAT GTTTGGCGTT 
CAGGCTCTAG TGGAATTAAC CAAAGGGATT GCTAAGTTCT CTGTGGTCGC ACTCGCGTCT 
TACCTGCTTC TAAGTCATTA TTTTAATGAT ATTTTGTTAC TTTCAGCAGA TCATCTTCCA 
GGGAATGTGT ATCACGCCTT AGATTTACTG GTATGGATGT TTATCCTGCT TTGCTCTTCT 
GTATTAGTCA TTGTGGTAAT CGATGTGCCA TTTCAGATCT GGAACCATAA TAAGCAGCTG 
AAAATGACTA AGCAGGAAGT TAAAGACGAA TATAAAGATA CTGAAGGTAA GCCTGAGGTT 
AAAGGGCGAG TTCGGCAAAT GCAGCGAGAA CTCGCGCAGC GACGTATGAT GGCAGAAGTG 
CCTAATGCGG ATGTGATAGT GGTAAACCCC GAGCACTATG CTGTCGCGAT TAAATACGAT 
GTTAAGCGCT CAGCAGCGCC ATTTGTGATT GCTAAAGGGG TGGACGAGGT CGCTTTTAAA 
ATTCGTGAGG TGGCTAGAGC GCACAATATT GCCATCGTTA CCGCTCCACC TCTTGCGCGG 
GCGATTTACC ATACCACTAA ACTTGATCAG CAAGTCCCCG AAGGCTTATT TACTGCAGTA 
GCGCAGGTGC TCGCCTATGT TTTCCAGTTA AGACAGTATC AAAAAGGGCG GGGGCGTAAA 
CCTATCCCGA TCCCTCTTAA TCAACCTATT CCTGATGATC TTAAGTACTA G 

 

Protein sequence

MAEESSGERS EEPTGRRLDQ AREKGQVARS KELGTATVLL SAATGLYMLG PGIAKALSNV 
FERVFTMDRA AIFDTNQMFN VWGVVGSEIG WPLLKIMLLI VVVAFIGNVS LGGMNFSTQA 
MMPKASKMSP IAGFKRMFGV QALVELTKGI AKFSVVALAS YLLLSHYFND ILLLSADHLP 
GNVYHALDLL VWMFILLCSS VLVIVVIDVP FQIWNHNKQL KMTKQEVKDE YKDTEGKPEV 
KGRVRQMQRE LAQRRMMAEV PNADVIVVNP EHYAVAIKYD VKRSAAPFVI AKGVDEVAFK 
IREVARAHNI AIVTAPPLAR AIYHTTKLDQ QVPEGLFTAV AQVLAYVFQL RQYQKGRGRK 
PIPIPLNQPI PDDLKY