Gene SO_3212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3212 
SymbolflhF 
ID1170905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3351747 
End bp3353123 
Gene Length1377 bp 
Protein Length458 aa 
Translation table11 
GC content47% 
IMG OID637345028 
Productflagellar biosynthesis regulator FlhF 
Protein accessionNP_718767 
Protein GI24374724 
COG category[N] Cell motility 
COG ID[COG1419] Flagellar GTP-binding protein 
TIGRFAM ID[TIGR03499] flagellar biosynthetic protein FlhF 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAGATTA AACGTTTTTT TGCCAAAGAT ATGCGTGCTG CACTGGCTCA AGTGAAAGAC 
ACTCTCGGCT CAGATGCGGT GATTATGTCG AATAAAAAAG TTAATGGTGG CATTGAGATC
GTTGCTGCGG TTGACTACGA CGAACCTAAA GCTAAAGCGT CGGCTGCGGC TCCAACCTTT
ATGGATGTGA GCGATGACTT AGTTTCTCTT GGCGGTAAGG CTCCTATTCG CGCTGAAACT
AAACTTAAAC CATCGGCGCC TGCTGACTCA TTACAAGCCT TGCTCGAGAA GCAACAAAAT
CGTTTAAACC AACAACTCAC GCATCAACAA CAAGATGCCG AGCTTCCTGC TTGGGCAAAA
GGATTACAGG CACCTGCTGC GGCTAAAGCT GAGCGCCGTG ATATCGCTAA TTCCTTCGAT
AAGAAACCGC AAACTTCGCA AAAGCAAAAT GCGGATCTTG AAGCGATGCG TGATGAGTTA
GCTTCCTTAC GTAATCTGCT CACTCATCAG GTTTCTGCTT TGATGACTGA GCATAAAAAA
CGTATCGATC CTGTCGGTGC CATGCTCGAA TCAAAACTAC TGGAGGCGGA GTTTTCTCCA
GCAGTAGCGA GTAAGTTAGC CGCATTAAGT CAGCACTATA CGCCCGCCGA GTTAGTACGA
GCCTTACCAC AAAGCTTAGC CAATATGCTG GATAATCAAG GCGATGATAT TGTTAAACAA
GGCGGCGTTG TGGCGTTGGT TGGTCCAACT GGCGTGGGTA AAACCACCTC CTTGGCTAAA
CTAGCTGCAC GATTTGCCGC CCATCATGGG GCTGACCAAG TGGCTTTGAT TACCACTGAC
CATTATCGTA TCGGTGCCTA TGAGCAATTA GCAACGTATG GCAAAATTAT GGGTTGCCCA
GTTAAACAAG CCCATGATCT TGCAGAGTTA GAGCAAATTC TTTATCAGTT CAGAAATCGC
AAGCTAGTAT TGATAGATAC CGCCGGTATG GGCCAACGAG ATATGCGGCT TTACCAGCAA
CTTGATAATT TAACTGCAAA TAGCAGAATA CCTATCCGCA GTTATCTGGT ACTGTCTGCG
ACTGGACAGC GCCGCGTGCT GCAGGATGCT GTAAATCACT TTAAACGCAT TCCATTATCT
GGTGTTGTAC TCACCAAACT CGATGAATCC GTGTCATTAG CGGGCGCATT AAGTGTGTTG
ATCCAAAGTG GGTTGCCATT AAGTTATGTT ACGGATGGGC AGCGAGTGCC CGAAGATATG
AAAGTCGCTG ATACTTTAAT GCTCGCGGAG CAGGCATTAG CGGCCTTAGA AAACACAGAA
CAACAATCGT TACCAGACAC AGCGTGGTCA GATAATATGA CCTGTGCATT CGAGTAG
 
Protein sequence
MKIKRFFAKD MRAALAQVKD TLGSDAVIMS NKKVNGGIEI VAAVDYDEPK AKASAAAPTF 
MDVSDDLVSL GGKAPIRAET KLKPSAPADS LQALLEKQQN RLNQQLTHQQ QDAELPAWAK
GLQAPAAAKA ERRDIANSFD KKPQTSQKQN ADLEAMRDEL ASLRNLLTHQ VSALMTEHKK
RIDPVGAMLE SKLLEAEFSP AVASKLAALS QHYTPAELVR ALPQSLANML DNQGDDIVKQ
GGVVALVGPT GVGKTTSLAK LAARFAAHHG ADQVALITTD HYRIGAYEQL ATYGKIMGCP
VKQAHDLAEL EQILYQFRNR KLVLIDTAGM GQRDMRLYQQ LDNLTANSRI PIRSYLVLSA
TGQRRVLQDA VNHFKRIPLS GVVLTKLDES VSLAGALSVL IQSGLPLSYV TDGQRVPEDM
KVADTLMLAE QALAALENTE QQSLPDTAWS DNMTCAFE