Gene SO_3206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3206 
SymbolcheB-3 
ID1170899 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3345536 
End bp3346660 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content47% 
IMG OID637345022 
Productchemotaxis-specific methylesterase 
Protein accessionNP_718761 
Protein GI24374718 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG2201] Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCCATTA AAGTATTAGT CGTTGATGAC TCAAGCTTTT TTAGACGACG TGTTAGTGAA 
ATAGTCAATC AAGATCCTGA ATTGGAAGTA ATCGCGACGG CCTCTAACGG GGCTGAAGCG 
GTGAAGATGA CAGCTGATCT CAATCCCCAA GTGATCACTA TGGATATCGA AATGCCAGTC 
ATGGACGGTA TCACAGCTGT CCGTGAAATC ATGGCAAAGT GTCCAACACC AATCCTGATG 
TTCTCTTCAT TAACCCACGA TGGCGCTAAG GCTACCTTAG ATGCGTTAGA TGCGGGCGCG 
TTAGATTTTT TACCTAAGCG TTTTGAAGAT ATTGCGACCA ATAAAGATGA AGCGATTTTA 
TTATTGCAAC AAAGAGTGAA GGCTCTTGGT CGTCGTCGAA TTTTTCGTCC AATAACACGT 
CCTAGTGTTG CTCCTGTTAC CCCAAGGCCA ACTACTGGCT CAGCGGTGGG AAATGCAACC 
ACACCCGTTC AAAGCGCCTC TGCGCCGGTT CGTTCTTCTC CTTTATCGTC TATTCGTGCC 
AGTGGTAAGC AATATAAATT ACTGCTGATT GGCACATCGA CAGGAGGTCC TGTCGCATTA 
CAGAAAGTGT TAACTCAGTT TCCTGCAAAT TATCCACATC CTATTTTGCT TATTCAGCAT 
ATGCCTGCGG CTTTTACCCC AGCGTTTGCG AGTCGATTAA ATGGTTTGTG TAAAATTGAG 
GTAAAAGAAG CGGCAAATGG CGATATTTTG CGTCCTGGAT GCGCGTATTT AGCGCCAGGT 
GGGATGCAGA TGATGGTCGA ACGTGCAGGT GTTACAGGAC GAATTAAAGT GCTCGCGGGT 
AGTGCCGAGA TGAATTATAA GCCTTGTGTT GATATCACTT TTGCTTCTGC TTCAAAAGCC 
TATGGTGGTG ATGTACTAGC GGTAGTGTTA ACCGGAATGG GGGCAGATGG CCGAGAAGGC 
GCTCGAATGC TCAAAGCAGC AGGTGCAACT ATTTGGGCGC AGGATGAAGC GAGTTGTGTC 
GTCTATGGCA TGCCTCAAGC CGTCGCAAGC ACAGGAATCG CAACGCAGTC TATTTCTTTG 
GATAACATGG CTGAGTCGAT TTTAAAAGAG TCTGCGCGTG GCTAG
 
Protein sequence
MAIKVLVVDD SSFFRRRVSE IVNQDPELEV IATASNGAEA VKMTADLNPQ VITMDIEMPV 
MDGITAVREI MAKCPTPILM FSSLTHDGAK ATLDALDAGA LDFLPKRFED IATNKDEAIL 
LLQQRVKALG RRRIFRPITR PSVAPVTPRP TTGSAVGNAT TPVQSASAPV RSSPLSSIRA 
SGKQYKLLLI GTSTGGPVAL QKVLTQFPAN YPHPILLIQH MPAAFTPAFA SRLNGLCKIE 
VKEAANGDIL RPGCAYLAPG GMQMMVERAG VTGRIKVLAG SAEMNYKPCV DITFASASKA 
YGGDVLAVVL TGMGADGREG ARMLKAAGAT IWAQDEASCV VYGMPQAVAS TGIATQSISL 
DNMAESILKE SARG