Gene SO_3203 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3203 
Symbol 
ID1170896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3343186 
End bp3344166 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content44% 
IMG OID637345019 
ProductCheW domain-containing protein 
Protein accessionNP_718758 
Protein GI24374715 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAAAT CGGTTGATGA AACTGTTTTT GATTTTTTTG AATTATTGCT GCACGAAGAC 
GATAGTGCGT TTAGTGCTTC CCCAATTAAA TCTCAAGCGA GTGCTACTTC AGCATTCGAT 
GTCAGTATAA AAACGGAAGC TCAGCAGTTA AATGATGCCA TTTTGGCTGA ACACGAGCGG 
AGTAAAGTGG ATGCTAGGGC CTCGATAGTG CCTGAGGCGC AATTGGCTCG AGCAAAAAGT 
ATTGTTACTG TTTCAACTAA GGAAAATGCT GAGCCGTTGG TGAATAAACA GGCGCTAGAA 
AGACTTCTCG CGCCTGTGCT AAAAACGCAA GCGCCTGATA TTCCTAAGCC CACAGAGCTT 
AACGAGCAGC CTTTACCGTT GCCAAAGCCT GTAGAAGCAA TTGCAGTCAC TAATGTTGTA 
AAGCCTGCAG ATGTTGAGTC ACAGCAAGTC GAGATCATAT CGACTGCCCC AGAAACGCAA 
GTCGGTTTTG CACCCCCGAG TGTGACAAAA GATTTGCAAG AAGTGCTCGA TGATGAGTTT 
CAAGTACTAT TCTTTAAAGT AGCAGGGTTA ACGCTGGCTG TCCCTTTAGT CAGTCTCGGT 
GGTATCGTCA AAGTAGAACG GATCAACCAT ATCATTGGAC GTCCTTCTTG GTTCCTTGGT 
GTACAAACTC ATCGAGAAGA ACAGTTAAAT CTAGTGGATA CCTGTGCGTG GGTGATGCCA 
GAAAAATACA CTGATAAACT GGCGCAATCG GTAAATTATC AATATCTTGT ATTATTAGAG 
GGCAGTAATT GGGGATTAGC TTGTGAGTCT CTTCTTAATG CAGTAAAAAT TCATAAATCG 
CAAGTAAATT GGCGCAGCAA AGCGGGGAAA CGTCCCTGGT TAGCTGGTGT GGTTAAAGAA 
CAAATGTGTG GCATTTTGCA CGTACAAGCC TTAGTACAAA TGCTTGATGC GGGTTTAGGC 
TGTCAGGACT CCATTGGTTG A
 
Protein sequence
MSKSVDETVF DFFELLLHED DSAFSASPIK SQASATSAFD VSIKTEAQQL NDAILAEHER 
SKVDARASIV PEAQLARAKS IVTVSTKENA EPLVNKQALE RLLAPVLKTQ APDIPKPTEL 
NEQPLPLPKP VEAIAVTNVV KPADVESQQV EIISTAPETQ VGFAPPSVTK DLQEVLDDEF 
QVLFFKVAGL TLAVPLVSLG GIVKVERINH IIGRPSWFLG VQTHREEQLN LVDTCAWVMP 
EKYTDKLAQS VNYQYLVLLE GSNWGLACES LLNAVKIHKS QVNWRSKAGK RPWLAGVVKE 
QMCGILHVQA LVQMLDAGLG CQDSIG