| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3197 |
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| Symbol | |
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| ID | 1170891 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3338754 |
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| End bp | 3339539 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637345014 |
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| Product | vacJ lipoprotein, putative |
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| Protein accession | NP_718752 |
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| Protein GI | 24374709 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2853] Surface lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTTGA AATGGATAGG GGTACTTTTA GGATGTGCAT TACTGCCCAA GGTTTATGGT
GCAGAGGTTG CTGTACCCGA TACCACTCCA AAGGACACTG CTTCAGCTGT AAAAATTACT
TACGAAGACC CAAGAGACCC CTTTGAAGGA TTTAACCGTG TGATGTGGGA TTTTAACTAT
CTGTATTTAG ATAGATATCT ATATCGTCCC GTCGCTCATG GTTATAACGA TTACATTCCG
TTGCCAGCCA AGATGGGGGT TAATAATTTT TTACAAAATT TAGAAGAACC CAGTAGTGTG
GTAAACAACC TGTTACAAGG CAAATGGGGA TGGGCTGCTA ATGCTGGAGG CCGTTTTACG
GTTAACACAA CCATAGGCTT GCTTGGTGTT ATTGATGTGG CAGACATGAT GGGGATGACA
CGTAAACAAG ACGAGTTTAA CGAAGTATTA GGCTATTACG GTGTCCCCAA TGGGCCTTAT
TTTATGGCGC CATTTGCAGG TCCTTATATC GTGCGTGAAC TCGCGTCAGA TTGGGTTGAT
GGTCTATACT TTCCCTTATC TGAACTCACA ATGTGGCAAT CCGTACTTAA ATGGGGTCTC
AAAAGCTTGC ATGCTAGAGC CTCGGCGATT GACCAAGAAA GGCTTGTTGA TAATGCGCTC
GATCCCTATG CCTTCGTGAA AGATGCGTAC ATACAACACA TGGACTATAA GGTCTATGAT
GGCAATGTTC CTCAAAAACA AGAAGATGAT GAGTTACTCG ATCAATACAT GCAAGAACTC
GAGTAA
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| Protein sequence | MKLKWIGVLL GCALLPKVYG AEVAVPDTTP KDTASAVKIT YEDPRDPFEG FNRVMWDFNY
LYLDRYLYRP VAHGYNDYIP LPAKMGVNNF LQNLEEPSSV VNNLLQGKWG WAANAGGRFT
VNTTIGLLGV IDVADMMGMT RKQDEFNEVL GYYGVPNGPY FMAPFAGPYI VRELASDWVD
GLYFPLSELT MWQSVLKWGL KSLHARASAI DQERLVDNAL DPYAFVKDAY IQHMDYKVYD
GNVPQKQEDD ELLDQYMQEL E
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