Gene SO_3195 details

Gene Information

• Locus tag: SO_3195
• ID: 1170889
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3336683
• End bp: 3337213
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637345012
• Product: peptide transporter
• Protein accession: NP_783517
• Protein GI: 28275262
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG3104] Dipeptide/tripeptide permease

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGATCCGTT TAGGTAAAAA TGAACCTAAC TCACCAGTTA AATTTGCTTT AGGTCTTGTG 
CTGTTAGCTA TCGGTTTCCT CTTTATGATT GGTGCCGTTG TTGAAATGGG CGGTGATGCC 
TCCGCTAAAT CAAGCATGTG GTGGTTAGTG GGTGCTTATT TCTTCCATAC CATGGGGGAA 
CTTTGCTTAT CACCTATTGG CTTATCTATG GTAACTAAGC TAGCTCCGCT GCGTATTGCC 
TCTTTAATGA TGGGAGCTTG GTTCCTATTC GTAGCTGCCG CAAACAAAAT TGGTGGTGTG 
GTGGGTTCCT TTATCGGCCA CGGCGGAGAA AAAGAAGAAC AACTTGCTAA TGCAATGGCA 
ATTTTCTCTG GTATTGCGAT TACCGCAGCT CTCTCAGGCG TTATTCTGTA CTTTATGGCG 
GATAAATTAG TCGATTGGAT GCACGGCGCG GAAAGCAAAC ATCATAACGA AGCTGAAGCG 
TTAGAAGCAG AAATTGCGGT AACTGCTGAA CACGAAGCAA TTAAACGATA G 

 

Protein sequence

MIRLGKNEPN SPVKFALGLV LLAIGFLFMI GAVVEMGGDA SAKSSMWWLV GAYFFHTMGE 
LCLSPIGLSM VTKLAPLRIA SLMMGAWFLF VAAANKIGGV VGSFIGHGGE KEEQLANAMA 
IFSGIAITAA LSGVILYFMA DKLVDWMHGA ESKHHNEAEA LEAEIAVTAE HEAIKR