Gene SO_3185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3185 
Symbol 
ID1170879 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3323470 
End bp3324546 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content35% 
IMG OID637345002 
Productpolysaccharide biosynthesis protein 
Protein accessionNP_718741 
Protein GI24374698 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0399] Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTGT TAAATAAGCC TGTTGCGCCA AATTTACAAA AATTGAATAG CTACCTAGAG 
CGCGTTCACG ATACTGGTTG GTACACAAAT TTCGGACCAC TACATAATGA ACTAACAGAA 
AAGCTGGAAG AGTATTTAGG TGTAAGTAAT CTGCTTCTGG TAAGTAATGG AACGTTGGCC 
ATTCAATTAG CTGCCAAAGT ATTCAATGTC AAACAAACGA TTACAACGCC ATTTTCATTC 
GTAGCAACGT CTTCTTCGCT CCTTTGGCAA GGAATAGATC TTGCGTACAG CGACATTGAA 
AGGTCTTCAC TCAATATTTG CCCTGAGGAG TTAGAAAAGA ATTGGAAATC GAATGATTCT 
TATGACTCTT TACTGGCTAC ACATGTATAT GGTAATCCGT GTGACGTGCA AAAAATTGAT 
GAAATTGCAA AGAAATATAA TAAAAAAATA ATGTATGATG CTGCACATGC ATTTGGAATA 
AAAGTTGGAA ATAAGTCTGT TCTAAGTTTT GGTGATGCAA GTACTTTAAG CTTTCATGCG 
ACAAAAGTAT TTCATACTGT TGAAGGTGGA GCTGTTATTT TTAAAGATAG AAATCACTTT 
GATGAAGCAA AAAGTCTGAT AAATTTTGGT ATTCAAAATG ATGGTACACT TGGTACTCCG 
GGAATAAATG CCAAACTAAA TGAGTATCAA GCCGCTGTTG GTCTATGTTT GCTAGAAAGT 
ATTGATGACA TTATTTGCCA CCGTTCAAAT CTCTTTGAAA TTTACAGAAA AGAATTAAGT 
AATGTTATTG AACTACCATT GTGGCATAGA GATTCAAATT ATAACGGAGC ATATATGCCA 
ATTTTGCCTT CAACAGAAGT TGAAAGGTTA AAAATTGGCG AGCAATTGAA AGCGAACAAT 
ATTCAATTCC GTAGATATTT TTACCCTTCA TTGGATAAAG CTTATCTTAG AGTGAAAAGC 
TTTAACTGCC CTGTGAGTAA TTATATTGCT GAAAATGCAC TGTGCCTACC ACTACATATG 
TACATGACAA AAGAAGACGT ACTAAAAATA ACAGCAACTA TCAAAGAGAT CTACTGA
 
Protein sequence
MILLNKPVAP NLQKLNSYLE RVHDTGWYTN FGPLHNELTE KLEEYLGVSN LLLVSNGTLA 
IQLAAKVFNV KQTITTPFSF VATSSSLLWQ GIDLAYSDIE RSSLNICPEE LEKNWKSNDS 
YDSLLATHVY GNPCDVQKID EIAKKYNKKI MYDAAHAFGI KVGNKSVLSF GDASTLSFHA 
TKVFHTVEGG AVIFKDRNHF DEAKSLINFG IQNDGTLGTP GINAKLNEYQ AAVGLCLLES 
IDDIICHRSN LFEIYRKELS NVIELPLWHR DSNYNGAYMP ILPSTEVERL KIGEQLKANN 
IQFRRYFYPS LDKAYLRVKS FNCPVSNYIA ENALCLPLHM YMTKEDVLKI TATIKEIY