Gene SO_3168 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3168 
Symbol 
ID1170862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3303957 
End bp3305165 
Gene Length1209 bp 
Protein Length402 aa 
Translation table11 
GC content40% 
IMG OID637344985 
ProductDnaJ domain-containing protein 
Protein accessionNP_718724 
Protein GI24374681 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTAA TGAACATCAT CAATACTTCG GCTTCAAGTC AATCCCGTAA CCGCTCGCAT 
ACACTCGAAA AATTGTGGCA AGACTACGAA AAAAAACAAT TAAGAAATAA ACGCTATCGA
ACAAAATTAG AGGTTTTTTA TCACGAGTTT ACCTCTCAAT TACTTGAAAA AGAGCAGGCC
ATATGTGATG CCTCAGCCCA ATGGGTGCGT CATTTATTGA CTTTTGTGCC GCGTAAATCC
ATCAAAGGTC GCCAACGTGA GGCGTTGCTA GAATGGATTG AAGAAGAATT AAGCATTCTT
GAATCTAATC CGTTTAATCC TATCAATACT CACGAAATAC GCGATAGCTT CACTAGCCTG
CTCATAGCTT ATCAAGCAAC GTTGCCTGAG CAAGACATTT ATCAGCACGA GCTTGATGCT
GTTCGTGAAG AGTTAGAATC TATGTTTGGC TTTGAGTTGG ATATAGACGA TGCGCAGTTG
TCTGAACTTA TTGATGAACC GGTGAAGTTC CACGCATTTT TTGAGCAAAT ATTGGCTGAG
CAGCACAATA AGGCTTTTGA TGACGGCGAC GCTGACAATG CGTTTGAGCA AGATGAGACT
GAGTATGGTG CCGACGATGA TGATTTTTTC TTTGAATCGA CTCAACCAGA GCAAGCGTTA
AGCCTTGAGT TATTTAGCGA TAAAACCATG AGCAAATTGT ATCGACAATT GGCGAATCAA
TTTCATCCTG ATAAAGAGCC TGAACCAGCT AAAAAGGCGC TGAAAAAAGA GTTGATGCAG
CAACTATCTC AAGCCAAGAA AAGCAAGGAT GCTGTCGCCT TGCTGATGTT GGCCCTTGAA
TATCTGCCAG AGTATAAGCT TGAGGCCGAT GCAGATCTAA TTAAACGTAT TGAGGCTGCG
TTGCAGGTTA AAATTGGTTT GTTAAATCGA GATTATCAAT CAATGCAGAA TGGCAATGAT
ATTAAAAGTA TGATTTGGCA ACGTTTTGGG AGTGGTTCAA AAGCGTCACG TGCTAAGGAG
TTAGCACAAT ATGGAGATGA TCTCACGATT GAAACTGAAG AGTTACTCGA AAAAGTCAGT
AAGATAAAAA CAGTACAAGC GGTACAAAAG GAATTGAACC AACGTAGCCG ACGGGGGAGT
TTAAACGACA TTTTTGATCT GGCTATGTTT AATAACGAAA CTTTTGATGA ATTTTGGCAA
TACAAATAG
 
Protein sequence
MSLMNIINTS ASSQSRNRSH TLEKLWQDYE KKQLRNKRYR TKLEVFYHEF TSQLLEKEQA 
ICDASAQWVR HLLTFVPRKS IKGRQREALL EWIEEELSIL ESNPFNPINT HEIRDSFTSL
LIAYQATLPE QDIYQHELDA VREELESMFG FELDIDDAQL SELIDEPVKF HAFFEQILAE
QHNKAFDDGD ADNAFEQDET EYGADDDDFF FESTQPEQAL SLELFSDKTM SKLYRQLANQ
FHPDKEPEPA KKALKKELMQ QLSQAKKSKD AVALLMLALE YLPEYKLEAD ADLIKRIEAA
LQVKIGLLNR DYQSMQNGND IKSMIWQRFG SGSKASRAKE LAQYGDDLTI ETEELLEKVS
KIKTVQAVQK ELNQRSRRGS LNDIFDLAMF NNETFDEFWQ YK