Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3167 |
Symbol | |
ID | 1170861 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3302662 |
End bp | 3303693 |
Gene Length | 1032 bp |
Protein Length | 343 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637344984 |
Product | dTDP-glucose 4,6-dehydratase |
Protein accession | NP_718723 |
Protein GI | 24374680 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1088] dTDP-D-glucose 4,6-dehydratase |
TIGRFAM ID | [TIGR01181] dTDP-glucose 4,6-dehydratase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGAATTC TTGTTACGGG TGGTGCGGGT TTTATTGGAT CGGCTTTGGT CCGTATGTTG ATTGAGCAAA CGGAGTCAGT GGTGCTCAAC TTCGATAAGC TGACCTATGC GAGCCATCCT GAATCTCTGG CGGGTGTTGC TGATAATGAG CGCTATCATT TTGTGCAGGC AGATATTTGC GATAGGGCAA GGTTAGAGCA GGTGTTGCAG CAATTCCAAC CCGATCTTAT GATGCATTTA GCGGCCGAAA GCCATGTGGA CCGTTCAATA GATGGGCCCG CGGAGTTTAT TCAAACCAAT ATCGTGGGAA CTTACACATT GCTCGAGGCA TGCCGTAGTT ATTATCAAAC TTTAGGGCAA GCACAACAGC GCCGTTTTCG ATTGCACCAT ATTTCCACCG ATGAGGTTTT TGGTTCTCTG ACAGAAACTG GATTGTTTAG CGAAACCTCT GCTTATGATC CGAGCTCGCC TTATTCAGCA AGTAAAGCTT CAGCGGATCA TTTGGTTCGT GCTTGGCATC GAACTTATGC TTTACCAATA GTTATTACCA ACTGCTCCAA TAACTATGGC CCTTTTCAAT ACCCTGAAAA GCTCATTCCC TTAATGGTCT CCAATGCGTT GCAGAGTAAA CCGTTACCAA TTTATGGTAA TGGTCAGCAA GTTCGCGATT GGTTGTATGT GGATGATCAC GTTAAGGCGC TCTATTTAGT CGCGACTCAA GGCCAGCTTG GACAAACCTA TAATATTGGT GGCTCCTGCG AGCAAACTAA TTTGACGGTT GTGCGGCACA TTTGCTCCTT ATTAGAGGAG TTAGTGCCTA CTCATCCGCA ATCCCTTGCA ATGGGTAATG CGGGTTTTGC TGATTTAATT CAGTATGTTG TTGACCGGCC TGGCCATGAT GTTCGCTATG CAATTGATGC CAGTAAAATT CAACGTGAAT TAGGTTGGCG ACCACAAGAA TCTTTTGAGT CAGGCCTCAG AAAAACGGTC GAGTGGATCA TTAATCAACA ATATCCTAAA ACGAGCGACT AG
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Protein sequence | MRILVTGGAG FIGSALVRML IEQTESVVLN FDKLTYASHP ESLAGVADNE RYHFVQADIC DRARLEQVLQ QFQPDLMMHL AAESHVDRSI DGPAEFIQTN IVGTYTLLEA CRSYYQTLGQ AQQRRFRLHH ISTDEVFGSL TETGLFSETS AYDPSSPYSA SKASADHLVR AWHRTYALPI VITNCSNNYG PFQYPEKLIP LMVSNALQSK PLPIYGNGQQ VRDWLYVDDH VKALYLVATQ GQLGQTYNIG GSCEQTNLTV VRHICSLLEE LVPTHPQSLA MGNAGFADLI QYVVDRPGHD VRYAIDASKI QRELGWRPQE SFESGLRKTV EWIINQQYPK TSD
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