Gene SO_3167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3167 
Symbol 
ID1170861 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3302662 
End bp3303693 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content46% 
IMG OID637344984 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionNP_718723 
Protein GI24374680 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAATTC TTGTTACGGG TGGTGCGGGT TTTATTGGAT CGGCTTTGGT CCGTATGTTG 
ATTGAGCAAA CGGAGTCAGT GGTGCTCAAC TTCGATAAGC TGACCTATGC GAGCCATCCT
GAATCTCTGG CGGGTGTTGC TGATAATGAG CGCTATCATT TTGTGCAGGC AGATATTTGC
GATAGGGCAA GGTTAGAGCA GGTGTTGCAG CAATTCCAAC CCGATCTTAT GATGCATTTA
GCGGCCGAAA GCCATGTGGA CCGTTCAATA GATGGGCCCG CGGAGTTTAT TCAAACCAAT
ATCGTGGGAA CTTACACATT GCTCGAGGCA TGCCGTAGTT ATTATCAAAC TTTAGGGCAA
GCACAACAGC GCCGTTTTCG ATTGCACCAT ATTTCCACCG ATGAGGTTTT TGGTTCTCTG
ACAGAAACTG GATTGTTTAG CGAAACCTCT GCTTATGATC CGAGCTCGCC TTATTCAGCA
AGTAAAGCTT CAGCGGATCA TTTGGTTCGT GCTTGGCATC GAACTTATGC TTTACCAATA
GTTATTACCA ACTGCTCCAA TAACTATGGC CCTTTTCAAT ACCCTGAAAA GCTCATTCCC
TTAATGGTCT CCAATGCGTT GCAGAGTAAA CCGTTACCAA TTTATGGTAA TGGTCAGCAA
GTTCGCGATT GGTTGTATGT GGATGATCAC GTTAAGGCGC TCTATTTAGT CGCGACTCAA
GGCCAGCTTG GACAAACCTA TAATATTGGT GGCTCCTGCG AGCAAACTAA TTTGACGGTT
GTGCGGCACA TTTGCTCCTT ATTAGAGGAG TTAGTGCCTA CTCATCCGCA ATCCCTTGCA
ATGGGTAATG CGGGTTTTGC TGATTTAATT CAGTATGTTG TTGACCGGCC TGGCCATGAT
GTTCGCTATG CAATTGATGC CAGTAAAATT CAACGTGAAT TAGGTTGGCG ACCACAAGAA
TCTTTTGAGT CAGGCCTCAG AAAAACGGTC GAGTGGATCA TTAATCAACA ATATCCTAAA
ACGAGCGACT AG
 
Protein sequence
MRILVTGGAG FIGSALVRML IEQTESVVLN FDKLTYASHP ESLAGVADNE RYHFVQADIC 
DRARLEQVLQ QFQPDLMMHL AAESHVDRSI DGPAEFIQTN IVGTYTLLEA CRSYYQTLGQ
AQQRRFRLHH ISTDEVFGSL TETGLFSETS AYDPSSPYSA SKASADHLVR AWHRTYALPI
VITNCSNNYG PFQYPEKLIP LMVSNALQSK PLPIYGNGQQ VRDWLYVDDH VKALYLVATQ
GQLGQTYNIG GSCEQTNLTV VRHICSLLEE LVPTHPQSLA MGNAGFADLI QYVVDRPGHD
VRYAIDASKI QRELGWRPQE SFESGLRKTV EWIINQQYPK TSD