Gene SO_3164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3164 
Symbol 
ID1170858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3300778 
End bp3301545 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content43% 
IMG OID637344981 
Producthypothetical protein 
Protein accessionNP_718720 
Protein GI24374677 
COG category[S] Function unknown 
COG ID[COG3758] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGCCA ATATCCAGAT TATCCGCTAT CAAGAATGCG AATCGAGCTT ATGGAAAAAT 
GGCGGCGGCA GCACTAAACA ACTGTTAATA TCGCCAAAGG ATGCTGACCT AACTAACTTT
GATTATAGGA TTAGCATTGC CACCATTTCG AGCGATGGCC CCTTCTCACC ATTTCCCGGC
ATAGATAGGC AGCTGTGTAT ATTAGAAGGT GCAGGCGTAA AACTTAAGAT GATGTCTGAT
GATTTGGCTG AGCCAAATCA ATTAATCCTT CGCCCCAATG AGCCGGCATT TTGTTTTAGC
GGCGAGACTC AGATCGAAAG CAAACTCTTA GATAAGCAAA TTATCGACTT TAATGTAATG
ACTAAACGCG GCAAGTACCG CGCGTATATT GAGCGGCTTG AGTTGAATGG CTCGTTAAAC
CCTGAGTCTA GTGAAACCAG CCATATTGAC GATGCTCATC AAACACCAAA TGTACACAAT
AACGAGTTGC AACAGTGGTT ATTGTGCCTT GAACCGCTGA ACTTAGTTTA CCAAGGCCAA
ATTATTCAAC TTAAGCGTTA TGATATGGTG CAATGCCTAC GAGGCCAGAA TTTAAAAGCG
CAGCCGTCAG AAATGCAGCG ATTAGAAGAA GTTGAAACTT CCGATGCAAC CTCTTCAGAC
GCTGAACTAC CAATACTTAA GCACACACAT ATAGAAAACC CGTCCCTACT ATACCATAAA
CAATGTCAGG TACTGCGTAT CGTTATAGAA TGCACTAAAA AGTTCTAG
 
Protein sequence
MSANIQIIRY QECESSLWKN GGGSTKQLLI SPKDADLTNF DYRISIATIS SDGPFSPFPG 
IDRQLCILEG AGVKLKMMSD DLAEPNQLIL RPNEPAFCFS GETQIESKLL DKQIIDFNVM
TKRGKYRAYI ERLELNGSLN PESSETSHID DAHQTPNVHN NELQQWLLCL EPLNLVYQGQ
IIQLKRYDMV QCLRGQNLKA QPSEMQRLEE VETSDATSSD AELPILKHTH IENPSLLYHK
QCQVLRIVIE CTKKF