Gene SO_3163 details

Gene Information

• Locus tag: SO_3163
• ID: 1170857
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3300032
• End bp: 3300484
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637344980
• Product: lipoprotein
• Protein accession: NP_718719
• Protein GI: 24374676
• COG category: [M] Cell wall/membrane/envelope biogenesis; [P] Inorganic ion transport and metabolism
• COG ID: [COG3015] Uncharacterized lipoprotein NlpE involved in copper resistance

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACATGA AACGTCCACT CTTTACTATC GCCTTGGTGG CAATCTTGAC TACCGCTTGT 
AACGATCCCC AAAATGCACC AAGCCAAGGC GCCACAGCAA ATGCAGAAAC TCAAACAACC 
ATCCCCCTTG GTGATACCAG TCAAAATGCT CTCGATTGGC CTGGCGTGTA TGAAGGTGTT 
TTACCCTGTG CGAGCTGCGA AGGTATTCAA ACCACGCTAA CACTACAGGC AGATAACAGC 
TTTGAATTAA AAAGCATTTA TTTGGGTAAA GATGAAAGTA TCTTCAAGGT GGCAGGAAAA 
TTTGACTGGG ATAGTAACGG CTCAAAAATC ACCTTATCCG ATGGCAGCAA ATATCTCGTC 
GGTGAAAACC AGCTATTGAT GCTTGATACA GAAGGCAACA GAATTACTGG CGGACTAGCT 
GAGCATTATA TCTTGAAAAA GAAAGGCATG TAG 

 

Protein sequence

MNMKRPLFTI ALVAILTTAC NDPQNAPSQG ATANAETQTT IPLGDTSQNA LDWPGVYEGV 
LPCASCEGIQ TTLTLQADNS FELKSIYLGK DESIFKVAGK FDWDSNGSKI TLSDGSKYLV 
GENQLLMLDT EGNRITGGLA EHYILKKKGM