| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3162 |
|---|
| Symbol | |
|---|
| ID | 1170856 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3298460 |
|---|
| End bp | 3299821 |
|---|
| Gene Length | 1362 bp |
|---|
| Protein Length | 453 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637344979 |
|---|
| Product | sensor histidine kinase |
|---|
| Protein accession | NP_718718 |
|---|
| Protein GI | 24374675 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGCA TGTTAGATAG GATTTTATTT GATGTAAGTC GTTCATCCAT TATTGATGGT
GGCGATTTAA TTGAAACATC ACAACTGATA GTTGCTTCTG TGTGCCAAGG CTTAAAAATC
AGCCGTGCCG GTATTTGGTT ATGGGCTGAC GATCATCAAA GTATGTGTTG CTTTTACCTG
CTTGATAATA TGCAAAGACA GGAAGCTTTT ATCTTAACGC GTGAGCAATA TCCCCATTAT
TTCAGCTTAT TAGATAATGA AAGGGCGATA GTGGCTAATC AGGCCCAAAC CGATCGTGCG
ACCCATGAGT TTGTAAAGAC TTACTTAGTG CCTCATGGCA TTACCTCGAT GTTAGATAGC
CCCATACGTC ATCGCGGCAT GATGGTGGGC ATTATCTGTT CTGAACATCA AGGAGATCCG
AGGGAATGGA CTCGCGATGA AAAAGCCTTT GCCTCTGCAT TGGCTGATTT ATTTGGTCGA
GCAATGAGTG CAAAGGAAAT TTTAGATTAT CAGCAGCAAT TAAAAGCCAT TAATGCGGAC
TTGGAGGCGC AAGTTGAATT AAGAACCCAA GAACTGGAAA CCGCATTATC GGATTTACGT
TCGACACAAC ATCATTTGAT TGAGAATGAG AAAATGGCGG CGTTAGGAAG TTTAGTGGCT
GGGGTGGCCC ATGAGGTCAA CACGCCTTTG GGGATTGCCG TAACGTCAGT AACCCATTGC
TTAGATGAAG TCGCCTTGTT AAAAGCTGCA TTTGAACAAA ATGAACTAGA TGAAGATAAA
TTCTTAACCT TTATTAATAC CATGCAAGAT GGTTTAGGAC TGATAGAGCG AAATTTGACG
CGGGCAGCGG AGTTAGTCCA TAACTTTAAG CGCACGGCGG CGGATCAATC GGTTCTTGAG
CGTGAACGAT TTAATTTAAA GGCTTATCTT TTCCAGATTT TTAGTTCATT AAGGCCATTA
ATGCGTAAAA AGAATATCGC ATTGACCGTC GAGCTTGATG AGCAGATTTT TATCGAGTCT
TACCCAGGCG CGATTGCGCA AATTTTTACC AATCTGGTTG CCAATAGCTT TCGGCATGGT
TTTCCTGAGC ATTTTACGGG TGATAAAAAA ATCACTATCC GAGTCGAAAA ACAAGGCTCG
AACATTTGCA TGCAATATCA AGATAATGGT GTTGGCATGA CAGATGAGGT CAAAATTAAA
GCCTTTGAAC CTTTTTTTAC CACTGCACGT AAAGATGGCG GCACAGGCCT AGGGATGTCG
ATTATTTATA ATCTGGTGAC TCAAAAGCTC CATGGCAGCA TTCTGCTGAC TTCCCAGCCT
AATCAAGGCG TAACAATCGA TATACAACTT CCGGAGCAAT AA
|
|---|
| Protein sequence | MTRMLDRILF DVSRSSIIDG GDLIETSQLI VASVCQGLKI SRAGIWLWAD DHQSMCCFYL
LDNMQRQEAF ILTREQYPHY FSLLDNERAI VANQAQTDRA THEFVKTYLV PHGITSMLDS
PIRHRGMMVG IICSEHQGDP REWTRDEKAF ASALADLFGR AMSAKEILDY QQQLKAINAD
LEAQVELRTQ ELETALSDLR STQHHLIENE KMAALGSLVA GVAHEVNTPL GIAVTSVTHC
LDEVALLKAA FEQNELDEDK FLTFINTMQD GLGLIERNLT RAAELVHNFK RTAADQSVLE
RERFNLKAYL FQIFSSLRPL MRKKNIALTV ELDEQIFIES YPGAIAQIFT NLVANSFRHG
FPEHFTGDKK ITIRVEKQGS NICMQYQDNG VGMTDEVKIK AFEPFFTTAR KDGGTGLGMS
IIYNLVTQKL HGSILLTSQP NQGVTIDIQL PEQ
|
|---|
| |