Gene SO_3157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3157 
Symbol 
ID1170851 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand+ 
Start bp3293643 
End bp3294353 
Gene Length711 bp 
Protein Length236 aa 
Translation table11 
GC content41% 
IMG OID637344974 
Productputative lipoprotein 
Protein accessionNP_718713 
Protein GI24374670 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTATAT ATAAAAGACT TTTTCCCTTT ATCGCTGCTT CGGCAGTATG TCTGAGCCTT 
TCGGGCTGTA GCCAACGCAT AAGCGCATTA AACGATACGG TTAAACTCGC CTTTTGGGGG 
AATGAAGATA TAGTGCTCTC ACCTGAGCAA GTATCAGCTA ATCCTTATGC GAGTATCTAT 
GTAAAAATTG AAGATACGGC CCAGGCATTT GTGGTATTAG CCTTTGCAGA GCCTAAAATC 
AGCCTATCTT CAGTAAAAAA CTCGCCCGAA GAACTCGAGC TTAAATGGTT ATCAGCAGAT 
AAAGGCATGT TAGTGACAGT TAACGGCCGC CTAGTCAAAA CCCATAATCT GCTCACAGGT 
AATTTAGCGG CAGTAGAAAG TGATGAGCCA GATCCACTGT TATTAGGATT GCACTTAAGC 
TCCACCCCAA AAACGTGGAC TCGAATGCTC GATTGGCAAC CCGGTTATCA TTATAGTTAC 
AAAGTAAAAT CAGAGTTTAA ACTGATTAGC GACGACAATA TTCTAATTAA TGGCACTCCC 
ACACAAGCTT TGCATTTTAG TGAAAGCGTC TCTGTGGATG CTCTCAATAT TCAATACCAA 
AATGAGTTTT GGCTAGATCC ACAAACTGGC AGTGTTATTA AGAGTCATCA AAAAATTGCG 
CCTAATCTGC CATTTATTGA TATCACCTTA CTTAAGCCTT TTGCTGCTTA G
 
Protein sequence
MRIYKRLFPF IAASAVCLSL SGCSQRISAL NDTVKLAFWG NEDIVLSPEQ VSANPYASIY 
VKIEDTAQAF VVLAFAEPKI SLSSVKNSPE ELELKWLSAD KGMLVTVNGR LVKTHNLLTG 
NLAAVESDEP DPLLLGLHLS STPKTWTRML DWQPGYHYSY KVKSEFKLIS DDNILINGTP 
TQALHFSESV SVDALNIQYQ NEFWLDPQTG SVIKSHQKIA PNLPFIDITL LKPFAA