| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3154 |
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| Symbol | proS |
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| ID | 1170847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | + |
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| Start bp | 3289870 |
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| End bp | 3291582 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637344970 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | NP_718710 |
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| Protein GI | 24374667 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCGTTA GCAAATACCT ACTTTCTACT CAAAAAGAAA CACCTGCAAA TGCAGAAGTC
ATCAGCCATC AATTAATGCT ACGTGCGGGC ATGATCCGTC GTAACGCTTC GGGTCTATAC
AGCTATCTGC CCTCGGGCCT GCGAGTATTG CGTAAAGTCG AGGCCATTGT TCGTGAAGAA
ATGAACAAAG CGGGCGCGAT TGAAATTCTA ATGCCTATGG TGCAACCGGC TGATTTGTGG
GTAGAAACGG GTCGCTGGGA TAAGTTTGGC CCTGAGTTAC TGCGCTTTAA AGACCGCCAT
AACCGTGACT TCGTTCTGGG ACCGACCCAC GAAGAAGTGA TCACCGACTT AATCCGTAAA
GAAGTCAGCT CTTACAAACA ATTACCGCTG AATCTTTATC AAATTCAAAC CAAATTCCGC
GACGAAGTTC GCCCACGCTT TGGCGTTATG CGTTCACGCG AATTCCTGAT GAAAGATGCG
TATTCTTTCC ATCTGGACAT GGACACCCTG AATGAAACCT ATGAGGCCAT GTACCAGGCC
TATAGCAACA TTCTGTCACG TATGGGTTTA GCCTTCCGTC CAGTATTAGC CGATACCGGT
TCTATCGGTG GCAGCATGTC ACACGAATTC CACGTACTGG CTCAAAGCGG TGAAGACTTA
ATCGCCTACT CTACGGGTAG CGACTATGCC GCTAACATTG AGAAAGCAGA ATCACCAATG
CCGACCGAAA CACGCGGCGC GGCGACTAAA GAATTACGTT TAGTCGATAC CCCCAATGCA
AAAACGATTG CCGAGTTAGT TGAGCAATTC GGTTTGGATA TCACTAAGAC TGTGAAAACC
TTAATCGTTA AAGGTGCGAC GGAAGAAGCA CCACTGGTTG CGCTGATTGT TCGTGGCGAC
CATGAACTAA ACGAAATCAA GGCAGACAAA TTAGATTTAG TGGCATCACC ACTTGAATTC
GCCCCAGAAG CCCTTATTCG TGACGCCATT GGTGCAGGCC CTGGTTCATT AGGTCCTGTT
GGCCTGAATA TGCCGATCAT TATCGACCAC AGTGTTAGCG TGATGAGCGA TTTTGCTGCC
GGCGCCAACG TGGACGATAA ACATTATTTT GGCATTAACT GGGAACGCGA TCTGCCACTG
GCGCAAGCTG CCGATATCCG TAACGTGGTT GAAGGTGAGC CAACGCCTGA TGGTTTAGGT
ACTTATGCTA TGGCTCGTGG TATCGAAGTG GGTCATATCT TCCAACTCGG CACTAACTAC
TCTAAATCCA TGAACGCGAC TGTTCTTGAC GAGAACGGTA AATCACAAGT GCTGCTGATG
GGTTGTTACG GTGTTGGCGT GAGCCGTATC GTGGCTGCTG CGATTGAGCA AAACTTTGAT
GACCGCGGCA TTGTATGGCC AGAAGCGATT GCCCCATTTA GCGTTGGCAT TCTGCCAATG
AATATGCACA AGTCGCACCG CGTCACCGAT ATCGCCGAGC AGTTATACAA AGACTTAAGC
GCTGCGGGTA TTGATGTGCT ACTGGACGAT CGTAAAGAGC GCCCTGGCGT GATGTTCGCC
GATATGGAGC TGATTGGTAT TCCTCACACT GTGGTGATTG GTGATCGCAA TATCGACGCT
GGCGTATTCG AATACAAAAA CCGCCGCACC GGTGAGAAGC AAGACGTACC ATTCGACCAA
ATCGTCGATT TTTTAAAGAA TCTGCAAGCT TAA
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| Protein sequence | MRVSKYLLST QKETPANAEV ISHQLMLRAG MIRRNASGLY SYLPSGLRVL RKVEAIVREE
MNKAGAIEIL MPMVQPADLW VETGRWDKFG PELLRFKDRH NRDFVLGPTH EEVITDLIRK
EVSSYKQLPL NLYQIQTKFR DEVRPRFGVM RSREFLMKDA YSFHLDMDTL NETYEAMYQA
YSNILSRMGL AFRPVLADTG SIGGSMSHEF HVLAQSGEDL IAYSTGSDYA ANIEKAESPM
PTETRGAATK ELRLVDTPNA KTIAELVEQF GLDITKTVKT LIVKGATEEA PLVALIVRGD
HELNEIKADK LDLVASPLEF APEALIRDAI GAGPGSLGPV GLNMPIIIDH SVSVMSDFAA
GANVDDKHYF GINWERDLPL AQAADIRNVV EGEPTPDGLG TYAMARGIEV GHIFQLGTNY
SKSMNATVLD ENGKSQVLLM GCYGVGVSRI VAAAIEQNFD DRGIVWPEAI APFSVGILPM
NMHKSHRVTD IAEQLYKDLS AAGIDVLLDD RKERPGVMFA DMELIGIPHT VVIGDRNIDA
GVFEYKNRRT GEKQDVPFDQ IVDFLKNLQA
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