Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3148 |
Symbol | |
ID | 1170842 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3285131 |
End bp | 3286405 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637344965 |
Product | hypothetical protein |
Protein accession | NP_718704 |
Protein GI | 24374661 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1228] Imidazolonepropionase and related amidohydrolases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCCAATG GCCGGATCGA AAAAATCGGC CAACAACTTA CGACCCCTTC GGGTTACCAA GTCCTCGATG CAACGGGCAA GCATGTAACC GCGGGTATTG TCGATGAGCA TTCTCATATT GCTATCAACG GCGGCACCAA TGAAGGCACG GATGCCGTTA CTGCTGAAGT GCGTATAGGC GATGTGATCA ATCCTGAAGA TGTCTCCATC TACCGAGCGC TTGCTGGCGG CGTGACCAGT GCTCAACTGC TTCACGGCAG CGCTAATCCT ATTGGCGGTC AATCACAATT GATCAAAATG AAATGGGGAG AAAGCGCCGA GCAGCTAAAG TTTGCCAATG CGCCAGCGAG CATCAAATTT GCCTTAGGTG AAAACGTCAA ACAGAGTAAC TGGGGCGAGA AATTTGTGCA GCGCTTCCCG CAGACGCGCA TGGGCGTAAA AGCCTTATTT GAAGAAACCT TCGATGCAGC ACTCGCCTAT GAAAATGCGC TGAAGGATTA TGATGATTTA CGCAGCAGTG AGAAGAAGAA AACCCTCGCG CCACGCCCAA GCTATCGCCT ACAGGCGGTG GCCGAAGTAT TAAAACAGCA ACGCGATGTG CATATTCACT CTTATGTGCA GTCGGAAATC TTAATGTTCC TGCGCTTAGC TGAGGCTTAC CGCTTTAAGG TGCAAACCTT TACCCACGTA CTCGAAGGTT ACAAGGTTGC CAGTGAACTC GCCGCCCATG GCGCAGGCGC ATCGACCTTT GCCGATTGGT GGGCCTATAA GTTCGAAGTC TATGATGCGA TCCCGCAAAA CGCGTGCCTG ATGCAAAAAC AAGGCGTGCT CACCAGTATC AACTCCGACG ACTATGAAAT GCAGCGCAGA CTTAACCAAG AAGCGGCTAA GTCGATGATG TATTGCGGAA TGTCAAAAGA AGATGCCTGG AATATGGTGA CCATCTACCC AGCAAAACAA CTCAGGGTCG ATGAATATGT AGGCTCGCTC ACCCCAGGCA AGATGGCCGA CATCGTACTG TGGAATGCTG AGCCGCTGTC GATTTACGCC AAGGTGACGC ACGCTTGGGT CGAAGGCAAA CGCTATTTCG ACCGCGAACA GGATCAACTC GCCCAGCAGC AAGTGGTCAC AGAGCGCGCA GCCCTTATCC AAAAAATTCT CAGTAGTGAT GATAACGCTA AAGCAGGCGA AAAAGTGACC CCACTTAACG AGCCACAATG GCATTGCGAT ACCCATTATC AAGCTTGGGG CCAACATCAT CAGGGAGCGA AATAA
|
Protein sequence | MANGRIEKIG QQLTTPSGYQ VLDATGKHVT AGIVDEHSHI AINGGTNEGT DAVTAEVRIG DVINPEDVSI YRALAGGVTS AQLLHGSANP IGGQSQLIKM KWGESAEQLK FANAPASIKF ALGENVKQSN WGEKFVQRFP QTRMGVKALF EETFDAALAY ENALKDYDDL RSSEKKKTLA PRPSYRLQAV AEVLKQQRDV HIHSYVQSEI LMFLRLAEAY RFKVQTFTHV LEGYKVASEL AAHGAGASTF ADWWAYKFEV YDAIPQNACL MQKQGVLTSI NSDDYEMQRR LNQEAAKSMM YCGMSKEDAW NMVTIYPAKQ LRVDEYVGSL TPGKMADIVL WNAEPLSIYA KVTHAWVEGK RYFDREQDQL AQQQVVTERA ALIQKILSSD DNAKAGEKVT PLNEPQWHCD THYQAWGQHH QGAK
|
| |