Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3136.1 |
Symbol | |
ID | 1170825 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | + |
Start bp | 3266258 |
End bp | 3267925 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637344952 |
Product | two-component sensor histidine kinase |
Protein accession | NP_783509 |
Protein GI | 28275254 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTGCCCA TGACGCCAAA AGCCAAACAA CGTCTGTTTA TGACCATAGT GCTACTTGCA GGTTTATTTG CCATCTTAAA ATTAACTTAC TGGGTGCATT TTTATCAGGG CAAAATCGAC ATCCAACAAC AATCAGAGAA ACAACTCAAA GAACTAGTGA GCTTTTTAGA TGGTGCCCTG TCGCGGTATG AGAGTATTCC CCATGTGCTC TCTACCAATC CTATGCTTGC CAATGTGCTC AACGACCAAC AAAATCCGCA AAAGGTACAA GAGCTCAACC TCTATTTAGA AGAAATTCAG CATGTCACCG AGGCTTCTGA TATTTACCTA ATTGATGCGC TAGGAATTGC GATTGCAGCC AGCAACTGGC AACAGCCTTT TTCATTTATC GGCAAAGACT ACTCTTTTAG ACCCTATTAC ACCGATGCAA TTTCAGGCAA TTTAGGTCGC TACTATGCGG TGGGCACCAG CTCGGATAAA CGCGGCTTTT ACTTTTCTTA TCCCATTTAT CAGCAAGGTG GAAAAGGCAT TCTGGGCGCC ATTATTGTGA AAGTGGATAT CGCCGATATT GAGCAGCAAA GCACCAGTAT AGCGATGGCA GGCCAATACC AATTTTTAAT CAGCGATCCC GACGATATTG TGTTTATTTC CAGTGTGGAT GAATGGCGTT TAACCTCACT GACACCGCTA ACCCAAGCCA AACAATATGC CTTAAATGCC TCAAAACGTT ACGCTGAGCG CCCCATTGGC GAACTTATAA TAAAACCACA ATATCAAGAC GATAGCACCA GCAGCGGTCA TATCTATCAC ATCCGCGAAG GCAACAGTCA GGCGCAATAT ATGGATACCC ATCATTTGAT GACCAAAGCC GGTTGGCGGG TGCATATTCT TGCGCCACTG AAACCGCTTC ACGAGTCAAT GCCTGCCCTC ATGCTGTTAT CGGCATCAAT CTACTTGCTG CTAGCCTTAG GTTTGCTCTT TAGCAGTGAG CGGCGCCGTA ACTTGCAGCG CATGCAATTA GCCCAAAGTT TGCTGGAGCA ACGAGTTGAG GAACGAACTT ACGATCTGCA GCAAGCCAAT GACCGCCTAA AAGATACCCA AGATGAATTG ATCCAAGCTG CCAAATTAAC CGTCATCGGT AGTTTATCCG CCAGCATCAA CCACGAGCTT AACCAGCCCT TGGCGGCCCT TCGCAGCTAC GCGCAAAATA CCCAAACCTT CCTTGCCCGC AATATGCAAG ATAAGGCATT GGATAATTTG AAGATTATTA TCGAGCTAAC CGACCGCTTA GCCGATATTG TTGGCCAATT TAAAAGCTTT ACTCGTAAGA GCCAAGGCAC GGATAGCGCG ACCGATCTTA AGGGCTGCAT CAAACAAGCA CTAACCATAG TCCAACCCGA AATCGACAAA CAAGGGGTTG AGCTCGATGT GCTTTTGCCC GAAGGACAAT ATCAGGTCTG GGGCGACAAG GTGCGATTGC AGCAAGTGTT TGTCAATATT ATGAGCAACG CCATTGTCGC CATGCAGCAA TCGGTAATAC GTAAGCTGAG TATTAGGGTA AACTGCCAAG ACAAGTTCTG TATCAGGATT CAGGCCCTGG CGTGCGCGAA AGCCAAATGG AGAAAATATT CGAGCCTTAT TTCACTACCA GCGAGCGCAC TGGCTTAG
|
Protein sequence | MLPMTPKAKQ RLFMTIVLLA GLFAILKLTY WVHFYQGKID IQQQSEKQLK ELVSFLDGAL SRYESIPHVL STNPMLANVL NDQQNPQKVQ ELNLYLEEIQ HVTEASDIYL IDALGIAIAA SNWQQPFSFI GKDYSFRPYY TDAISGNLGR YYAVGTSSDK RGFYFSYPIY QQGGKGILGA IIVKVDIADI EQQSTSIAMA GQYQFLISDP DDIVFISSVD EWRLTSLTPL TQAKQYALNA SKRYAERPIG ELIIKPQYQD DSTSSGHIYH IREGNSQAQY MDTHHLMTKA GWRVHILAPL KPLHESMPAL MLLSASIYLL LALGLLFSSE RRRNLQRMQL AQSLLEQRVE ERTYDLQQAN DRLKDTQDEL IQAAKLTVIG SLSASINHEL NQPLAALRSY AQNTQTFLAR NMQDKALDNL KIIIELTDRL ADIVGQFKSF TRKSQGTDSA TDLKGCIKQA LTIVQPEIDK QGVELDVLLP EGQYQVWGDK VRLQQVFVNI MSNAIVAMQQ SVIRKLSIRV NCQDKFCIRI QALACAKAKW RKYSSLISLP ASALA
|
| |