| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3127 |
|---|
| Symbol | |
|---|
| ID | 1170816 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | - |
|---|
| Start bp | 3254331 |
|---|
| End bp | 3255959 |
|---|
| Gene Length | 1629 bp |
|---|
| Protein Length | 542 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637344931 |
|---|
| Product | Ada regulatory protein, putative |
|---|
| Protein accession | NP_718688 |
|---|
| Protein GI | 24374645 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[L] Replication, recombination and repair |
|---|
| COG ID | [COG0122] 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase
[COG2169] Adenosine deaminase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCAAA TATCCGTGAG CCTAAATTCA GCCGCTAAAC CGCCACACGA GCAAGTATCA
GCAGCATTAG AGGATTGTCA TTTATCCGCG AGCGTTTGCC GCGAAGCCCG TACCAGCCGT
GATCCACGCT TTGACGGTAA GTTTTTTGTC GGCGTTCTCA CTACAGGAAT TTATTGCCGA
ACCGTATGTC CCGCCGTTGC ACCTAAAGAA GAAAACGTGC GTTATTTCGA TTCAGCTATC
AAAGCCGCAC AGGCGGGACT GCGACCTTGT CTTCGTTGCC GGCCAGATAG TGCGCCGGGC
TCTAATCCAT GGAAAGGCAC TGGCACTACC TTAGATAGGG CTATTGGTTT GATTGAAGCG
GGCGCCTTAT CTGGCGAGCA CGGATTAACG GTCGAGGCGT TGGCGGACAA ACTAGGTATC
AGTAGCCGCT ATTTAAATAA GTTGTTTACT TCTGGATTTG GCACTTCACC CAAGCAATAT
GCGCTCTATC GACAACTGTT ATTTGCCAAA CAATTATTGC ATCAAACTCA ATTACCGATC
ACGCAAATAG CGCTTGCTGC CGGATTCAAT AGTATTCGTC GTTTCAATGA AGCTTTTCAG
CAGGCGCTGC AATTAACGCC TACACAGTTA AGAAAATCCA GCCAGAAGTC GGCAGCAAAG
ATAGACGAAG GGGAGGGTTC CGATACCGCT TGTCCGCAGG CGATGCCGGC CCATAGTTTA
AGTTTGTATC AGTATTATCG TCCGCCGCTC GATTGGCAGG CGCAGCTGGC CTTTTATCGC
CTGCGCGCTG TTGCTGGAAT GGAATGGTTT AGCAATACAG ATAATGACTG CCTCGAAAAG
ATAGCACAGG ATAAACAAGC GCTTGAGTAT GGCCGCACCC TGCAGATCGA CGATATACGT
GCGGTGGTGC ATATCATCCA TGAGGCGCAT TTACATCGCT TTAAACTCAC GCTGACATTC
ACGCCAGACT CGCCCATAGC GGGCCTACAA AAACTCATTA CCCAAGTGCG GCGCATTTTA
GATCTCGATG CCGATATGCA GCAGATTGAG CATAACTTAC AGCGTTTGAC CGATCTTAAG
CTAATCCCTA AATCAGGGCT TAGGATCCCT GGCGCCGGCT CTTTGTTCGA GGCGGGCTGC
CGAGCCATTT TAGGACAGCA GGTGACTGTG GTGCAGGCCA CTAAGTTACT CAATTTATTG
GTCGACGCCT ATGGTGAACG CTTTAGTTTA AATGGGCGAG AATATCGCTT GTTTCCCATA
CCGCAGGCGA TTCGCGGTGC TAGTTTGGAT GAATTGAAAA TGCCCGGCGC GCGCAAGCTG
GCGCTCAATG CGCTCGCGGC GTTTATCTGT GAGCGCCCTA ATGCGAGTGT TGATGATTGG
CTTGAGGTCA AAGGTATCGG CCCTTGGACG ATTGCCTATG CAAAATTACG TGGGCTTGGC
GAGCCGAATA TTTTCCTTCA CACTGATCTT ATTGTGAAAA AACAATTACT GGTGAGTGTG
GCTGAGCAGA ATGGATTGGA TGCACAAGCG TTGAAACAAC TCGATTATCT AACGCTTTGT
CAACGTATTA GCGCGGATAT TGCTCCTTGG GGGAGTTATT TGACCTTCCA ACTCTGGTCG
AATGCGTAA
|
|---|
| Protein sequence | MKQISVSLNS AAKPPHEQVS AALEDCHLSA SVCREARTSR DPRFDGKFFV GVLTTGIYCR
TVCPAVAPKE ENVRYFDSAI KAAQAGLRPC LRCRPDSAPG SNPWKGTGTT LDRAIGLIEA
GALSGEHGLT VEALADKLGI SSRYLNKLFT SGFGTSPKQY ALYRQLLFAK QLLHQTQLPI
TQIALAAGFN SIRRFNEAFQ QALQLTPTQL RKSSQKSAAK IDEGEGSDTA CPQAMPAHSL
SLYQYYRPPL DWQAQLAFYR LRAVAGMEWF SNTDNDCLEK IAQDKQALEY GRTLQIDDIR
AVVHIIHEAH LHRFKLTLTF TPDSPIAGLQ KLITQVRRIL DLDADMQQIE HNLQRLTDLK
LIPKSGLRIP GAGSLFEAGC RAILGQQVTV VQATKLLNLL VDAYGERFSL NGREYRLFPI
PQAIRGASLD ELKMPGARKL ALNALAAFIC ERPNASVDDW LEVKGIGPWT IAYAKLRGLG
EPNIFLHTDL IVKKQLLVSV AEQNGLDAQA LKQLDYLTLC QRISADIAPW GSYLTFQLWS
NA
|
|---|
| |