| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3125 |
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| Symbol | |
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| ID | 1170814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella oneidensis MR-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004347 |
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| Strand | - |
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| Start bp | 3252401 |
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| End bp | 3253684 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637344929 |
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| Product | DEAD-box ATP dependent DNA helicase |
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| Protein accession | NP_718686 |
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| Protein GI | 24374643 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCAAG CTTCTTCCTC CGTCGCCAGC TTTGCCGAAC TTGGCATTAT TGCACCGCTA
GGTAATCGAC TAACCGAGCT CGGTTATGTT TCACCCACCC CTGTACAAGC GGCCACGATT
CCAGCCGTGC TGAGTGGGCG GGACGTATTA GCGGGGGCAA ATACCGGCTC AGGAAAAACC
GCCGCTTTTG CACTGCCCTT ATTGCAGCGT TTGAGTGAAG CAAAAAGTGC TGATAAGTCG
GCCGGTGTTG TACGTTGTTT GGTGCTCGTG CCTACGCGCG AATTGGCACA GCAAGTTGCC
GATAGCTTTT TATCCTATGC ATCCCACTTC AATGGCCAAC TTAAGATTGT CGCCGCTTTT
GGTGGTGTGT CTGTCAATCT GCAAATGCAA AGCCTACGCG CTGGCGCGGA TGTTCTGGTT
GCAACGCCTG GGCGTTTACT GGATTTATTA GCAAGCAACG CGCTTAAGTT AACTCAAGTG
TCTGCATTCG TCCTCGATGA AGCGGATCGC ATGTTAAGCC TTGGCTTTAC CGAAGAGTTA
GAACAAGTGC TTGCAGCGTT ACCGCGTCAA AAGCAAACCC TATTGTTTTC GGCGACCTTC
CCCGAAGAAG TGCGTGCACT GACAACCAAA TTACTCCATC AACCGCTTGA ATATCATCTG
CAAAGTGAGC AAGAAAGTAC CATTGAGCAG CGTGTGATAA CCGTGAACCG TGAACAAAAA
ACGGCGTTGT TGGCCCACTT GATTAAACAG CATCAATGGT CACAGGCATT GATTTTTGTC
AGTGCTAAAA ATACCTGTAA TCATCTTGCA CAAAAGCTCT CAAAACGTGG GATTAGCGCT
GAAGTATTCC ATGGCGATAA AGCCCAAGGT GCACGAACTC GCGTGCTCGA TGGTTTTAAA
AATGGTGAAA TTAGTGTGCT GATTGCGACC GATATCGCAG CTCGTGGTAT TGATATTGAT
AAACTCCCCG TCGTGATTAA CTTTGATTTG CCAAGAAGCC CGGCAGATTA TATGCACCGT
ATTGGTCGTA GTGGCCGTGC GGGGGAGGCG GGTCTTGCGG TGACCTTAAT TTCCCATGAG
GAATATCATC ACTTTGGCGT GATTGAAAAG AAAAACAAAA TCAAACTTGT ACGTGAACAA
ATCCCCGGAT TTGAAGCCAA TGCCGAAATA CCGCTTGAAG TGTTAGCGCA GGAAAAACCT
CAGGCCAAGC CTGAAGGCAC TGGCAAGAAA AAACGTAAGC AGTTACCCGC AGCGAATGTT
GAATTTTGGG GTAAAAAGTC TTAA
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| Protein sequence | MTQASSSVAS FAELGIIAPL GNRLTELGYV SPTPVQAATI PAVLSGRDVL AGANTGSGKT
AAFALPLLQR LSEAKSADKS AGVVRCLVLV PTRELAQQVA DSFLSYASHF NGQLKIVAAF
GGVSVNLQMQ SLRAGADVLV ATPGRLLDLL ASNALKLTQV SAFVLDEADR MLSLGFTEEL
EQVLAALPRQ KQTLLFSATF PEEVRALTTK LLHQPLEYHL QSEQESTIEQ RVITVNREQK
TALLAHLIKQ HQWSQALIFV SAKNTCNHLA QKLSKRGISA EVFHGDKAQG ARTRVLDGFK
NGEISVLIAT DIAARGIDID KLPVVINFDL PRSPADYMHR IGRSGRAGEA GLAVTLISHE
EYHHFGVIEK KNKIKLVREQ IPGFEANAEI PLEVLAQEKP QAKPEGTGKK KRKQLPAANV
EFWGKKS
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