Gene SO_3123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3123 
SymbolcheV-2 
ID1170812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3250827 
End bp3251726 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content48% 
IMG OID637344927 
Productchemotaxis protein CheV 
Protein accessionNP_718684 
Protein GI24374641 
COG category[K] Transcription
[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA AGGCAAATCA GTCACAAGGT TTACTCCTTT TTAGGTTATC TCAACATCAG 
ATATTTGCCT TAGGCACACT TAAAATTCGT GAGTTAGTGC CATATACGCC GCTGAGTAAA 
ATTCCTCAAT CCCATCCCAC CATCCTTGGT GCGGCAACCA TTCGTGGTCA TACCATTCCT 
GTGGTGGATA TGGCTGCGGC AATTGGTTAT CGTCCTGTCA GCGATGAAGA GCGCCAACAT 
TGCTATATCA TCATCACCGA TTGTCAGCGG ATGATTATCG GATTTTTAGT GCGCGCCATT 
GATAAGATTA TCGAATGCAA TTGGCGCGAC ATTGAGGCTC CATCGGCAAA TTTAGGCAAA 
AATGCCTTTT TAACCGGGGT GACGCGCTAC GATAATCAGT TAGTGCAGTT ACTTGATGTT 
GAGCTGTTGC TGTCTAAGGT ATTCCCCGAT GCACCCGAGG CGAATCGCGC GATCTTAACG 
GATGTACAGA GGGAGAAGTT AAAACCTAGG CGCATTCTGT TGGTCGATGA TTCCAAGGTG 
GCCCGCAAGC AGCTCTCCGA TGCGCTCGAT AGTATTAATA TTCCCTATTT TGTGACGCCG 
GATGGCAGAG AAGCGTTGTC TATTATGGAG CAGGCTGCGG CCGAGCATCA TCCGATTGAT 
ATTCTTGTCA GCGATATTGA AATGCCGGGG CTCGATGGCT ATGAGCTGGC ATTTGAAGTC 
CGTGATAATC CACTGCTGGC GAACGCTTAT ATTATTTTGC ATACCTCGCT GTCGAGTGAG 
ATCAGTGTCA GCCAAGCCCA TCAAGTGGGG GCAAATGAGG CATTGACTAA GTTTGATGCC 
CATGAGCTGG TGGAAGCCAT GTTACGGGGC GCCGAGTTAG CGGCTAAGCG AGCAAATTAG
 
Protein sequence
MKSKANQSQG LLLFRLSQHQ IFALGTLKIR ELVPYTPLSK IPQSHPTILG AATIRGHTIP 
VVDMAAAIGY RPVSDEERQH CYIIITDCQR MIIGFLVRAI DKIIECNWRD IEAPSANLGK 
NAFLTGVTRY DNQLVQLLDV ELLLSKVFPD APEANRAILT DVQREKLKPR RILLVDDSKV 
ARKQLSDALD SINIPYFVTP DGREALSIME QAAAEHHPID ILVSDIEMPG LDGYELAFEV 
RDNPLLANAY IILHTSLSSE ISVSQAHQVG ANEALTKFDA HELVEAMLRG AELAAKRAN