Gene SO_3122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3122 
Symbol 
ID1170811 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand
Start bp3249429 
End bp3250655 
Gene Length1227 bp 
Protein Length408 aa 
Translation table11 
GC content46% 
IMG OID637344926 
Productserine/threonine transporter SstT 
Protein accessionNP_718683 
Protein GI24374640 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3633] Na+/serine symporter 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGG AATCATCTTT TTTAGCCAAG TTGGCTAATG GCAGTTTGGT ACTGCAAATT 
CTCGTGGGGA TTATCGCTGG TGTTGCTTTA GCCAGTTTTT CACATGAATG GGCCAAGCAA
GTCGCGTTTT TAGGCAGTTT ATTCGTTGGT GCATTAAAGG CTATCGCGCC AATTTTAGTT
TTTATTCTCG TGGCGTCTTC TATCGCCAAT CAAAAGAAAA ATACTCAAAC CAATATGCGC
CCGATCGTGG TGCTGTACTT ATTGGGTACC TTCGCTGCCG CATTAACTGC GGTGATTTTA
AGTATGATGT TCCCGACGAC TCTCGTGTTG GCCGCGGGTG TTGAAGGCAC CAGTCCACCG
CAAGGGATTA GTGAGGTGAT CAGTACCCTG TTGTTCAAAC TGGTTGATAA CCCAGTTAAC
GCGCTAATGA CGGGTAACTA TATTGGTATT TTGGCTTGGG GTGTGGGTCT TGGTTTGGCT
CTACATCATT CGAGCGACTC AACCAAACAA GTGTTTGCGG ATGTCAGCCA TGGTATTTCG
CAAATGGTAC ATTTTATTAT TCGTTTAGCA CCTATTGGTA TTTTTGGCCT CGTTGCCGCC
ACCTTTGCCG AAACAGGTTT TGCTGCAATT GCGGGCTACG CGCAGTTATT AGCCGTATTA
CTCGGTGCGA TGGCTTTCAT TGCTTTAATT ATTAACCCAT TGATTGTTTA TGTGAAAATT
AAACGTAATC CTTATCCACT TGTGATTCGT TGTCTGCGTG AAAGTGGTAT GACAGCATTT
TTTACTCGTT CAAGTGCGGC CAATATTCCG GTCAACATGG CATTGTGTGA AAAGTTAAAG
CTGCATGAAG ATACTTACGC TGTCTCTATC CCTTTAGGGG CGACTATCAA CATGGGCGGC
GCGGCGATTA CTATTACCGT ATTGACGTTA GCCGCGGCTC ATACTTTAGG CATTCAAGTC
GATTTGTTAA CGGCTTTGCT GCTCAGCGTA GTGGCAGCAA TTTCTGCCTG TGGTGCATCG
GGCGTTGCAG GCGGTTCTTT ACTGCTGATC CCGCTAGCCT GTAGTTTGTT TGGTATTTCT
AACGATGTTG CCATGCAAGT CGTTGCGGTA GGCTTTATTA TCGGTGTGAT TCAAGATGCT
GCCGAAACCG CACTGAATAG CTCTACAGAC GTGATTTTTA CCGCTGCCGC TTGTGAAGCC
GCTGAAAACA AAGCTAAACT TGGATAA
 
Protein sequence
MKQESSFLAK LANGSLVLQI LVGIIAGVAL ASFSHEWAKQ VAFLGSLFVG ALKAIAPILV 
FILVASSIAN QKKNTQTNMR PIVVLYLLGT FAAALTAVIL SMMFPTTLVL AAGVEGTSPP
QGISEVISTL LFKLVDNPVN ALMTGNYIGI LAWGVGLGLA LHHSSDSTKQ VFADVSHGIS
QMVHFIIRLA PIGIFGLVAA TFAETGFAAI AGYAQLLAVL LGAMAFIALI INPLIVYVKI
KRNPYPLVIR CLRESGMTAF FTRSSAANIP VNMALCEKLK LHEDTYAVSI PLGATINMGG
AAITITVLTL AAAHTLGIQV DLLTALLLSV VAAISACGAS GVAGGSLLLI PLACSLFGIS
NDVAMQVVAV GFIIGVIQDA AETALNSSTD VIFTAAACEA AENKAKLG