Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SO_3122 |
Symbol | |
ID | 1170811 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella oneidensis MR-1 |
Kingdom | Bacteria |
Replicon accession | NC_004347 |
Strand | - |
Start bp | 3249429 |
End bp | 3250655 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637344926 |
Product | serine/threonine transporter SstT |
Protein accession | NP_718683 |
Protein GI | 24374640 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3633] Na+/serine symporter |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACAGG AATCATCTTT TTTAGCCAAG TTGGCTAATG GCAGTTTGGT ACTGCAAATT CTCGTGGGGA TTATCGCTGG TGTTGCTTTA GCCAGTTTTT CACATGAATG GGCCAAGCAA GTCGCGTTTT TAGGCAGTTT ATTCGTTGGT GCATTAAAGG CTATCGCGCC AATTTTAGTT TTTATTCTCG TGGCGTCTTC TATCGCCAAT CAAAAGAAAA ATACTCAAAC CAATATGCGC CCGATCGTGG TGCTGTACTT ATTGGGTACC TTCGCTGCCG CATTAACTGC GGTGATTTTA AGTATGATGT TCCCGACGAC TCTCGTGTTG GCCGCGGGTG TTGAAGGCAC CAGTCCACCG CAAGGGATTA GTGAGGTGAT CAGTACCCTG TTGTTCAAAC TGGTTGATAA CCCAGTTAAC GCGCTAATGA CGGGTAACTA TATTGGTATT TTGGCTTGGG GTGTGGGTCT TGGTTTGGCT CTACATCATT CGAGCGACTC AACCAAACAA GTGTTTGCGG ATGTCAGCCA TGGTATTTCG CAAATGGTAC ATTTTATTAT TCGTTTAGCA CCTATTGGTA TTTTTGGCCT CGTTGCCGCC ACCTTTGCCG AAACAGGTTT TGCTGCAATT GCGGGCTACG CGCAGTTATT AGCCGTATTA CTCGGTGCGA TGGCTTTCAT TGCTTTAATT ATTAACCCAT TGATTGTTTA TGTGAAAATT AAACGTAATC CTTATCCACT TGTGATTCGT TGTCTGCGTG AAAGTGGTAT GACAGCATTT TTTACTCGTT CAAGTGCGGC CAATATTCCG GTCAACATGG CATTGTGTGA AAAGTTAAAG CTGCATGAAG ATACTTACGC TGTCTCTATC CCTTTAGGGG CGACTATCAA CATGGGCGGC GCGGCGATTA CTATTACCGT ATTGACGTTA GCCGCGGCTC ATACTTTAGG CATTCAAGTC GATTTGTTAA CGGCTTTGCT GCTCAGCGTA GTGGCAGCAA TTTCTGCCTG TGGTGCATCG GGCGTTGCAG GCGGTTCTTT ACTGCTGATC CCGCTAGCCT GTAGTTTGTT TGGTATTTCT AACGATGTTG CCATGCAAGT CGTTGCGGTA GGCTTTATTA TCGGTGTGAT TCAAGATGCT GCCGAAACCG CACTGAATAG CTCTACAGAC GTGATTTTTA CCGCTGCCGC TTGTGAAGCC GCTGAAAACA AAGCTAAACT TGGATAA
|
Protein sequence | MKQESSFLAK LANGSLVLQI LVGIIAGVAL ASFSHEWAKQ VAFLGSLFVG ALKAIAPILV FILVASSIAN QKKNTQTNMR PIVVLYLLGT FAAALTAVIL SMMFPTTLVL AAGVEGTSPP QGISEVISTL LFKLVDNPVN ALMTGNYIGI LAWGVGLGLA LHHSSDSTKQ VFADVSHGIS QMVHFIIRLA PIGIFGLVAA TFAETGFAAI AGYAQLLAVL LGAMAFIALI INPLIVYVKI KRNPYPLVIR CLRESGMTAF FTRSSAANIP VNMALCEKLK LHEDTYAVSI PLGATINMGG AAITITVLTL AAAHTLGIQV DLLTALLLSV VAAISACGAS GVAGGSLLLI PLACSLFGIS NDVAMQVVAV GFIIGVIQDA AETALNSSTD VIFTAAACEA AENKAKLG
|
| |