Gene SO_3117 details

Gene Information

• Locus tag: SO_3117
• ID: 1170806
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3245211
• End bp: 3245765
• Gene Length: 555 bp
• Protein Length: 184 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 637344922
• Product: thioredoxin, putative
• Protein accession: NP_718679
• Protein GI: 24374636
• COG category: [C] Energy production and conversion; [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0526] Thiol-disulfide isomerase and thioredoxins

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGACACGTG TAAAGCCAAC GGCTACGTCA TCTCAATCAA AGGGGTGGAG ACAAACACTT 
CAAAGCCCTA GATTTTGGCT AAAGCAGCTT AGGGATCTGG CCATTATGGC GCTACTACTC 
TATGGGGTAA GCCTCTATTT GCAACGGGAT ATGGTCACCG GAGAAGCCCC AACACTCAAC 
GGCATCGCCA TTGATGGCAA TCATCTTGCG CTAGATACAG CGCAAACCAA GCCCACCTTA 
GTGTATTTCT GGGGGACTTG GTGTCCAGTA TGCCGCGTAA CTTCGCCTAT GGTTGAAACC 
ATCAACCAAG ACCATAGAGT GATTTCAGTC GCCGTTGCTT CGGGCAGTGA TAGCAACATT 
CAAACCTATA TGGACGAGCA TCAATATCAT TTTCCGGTAC TGAACGATGA CAGTGGCGAG 
CAAAGTGCTA AGTGGGGAGC GATGGCATTC CCAGCTATTT ATATTGTCGA TACGCAAGGG 
GATATTCGGT ATGTCACCTC GGGAATCACA TCCACTTGGG GGATGAAGTT CAGATTATGG 
TTAGCGCAGT TTTAA 

 

Protein sequence

MTRVKPTATS SQSKGWRQTL QSPRFWLKQL RDLAIMALLL YGVSLYLQRD MVTGEAPTLN 
GIAIDGNHLA LDTAQTKPTL VYFWGTWCPV CRVTSPMVET INQDHRVISV AVASGSDSNI 
QTYMDEHQYH FPVLNDDSGE QSAKWGAMAF PAIYIVDTQG DIRYVTSGIT STWGMKFRLW 
LAQF