Gene SO_3107 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSO_3107 
Symbol 
ID1170796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella oneidensis MR-1 
KingdomBacteria 
Replicon accessionNC_004347 
Strand- 
Start bp3236072 
End bp3236617 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content49% 
IMG OID637344912 
Producthypothetical protein 
Protein accessionNP_718669 
Protein GI24374626 
COG category[S] Function unknown 
COG ID[COG4681] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTTA AAGCGACGGT GTTTAAGGTC AACCTTCAGA TAGCCGATAT GGACCGGGGT 
TATTATCAAG ATCATCAGCT GACATTGGCG CAGCATCCCT CGGAAACGGA TGGGCGCATG 
ATGGTTCGCC TGTTGGCATT TATCCTCAAT GCCTCTGAGA CCTTAAGTTT TACTAAGGGC 
CTGTGCGTCG ACGATGAACC CGAACTATGG GACAAGAGCC TCTCTGGAGA AGTTGACCTA 
TGGATTGAGT TTGGCCAAGC GGATGAAAAA TGGCTGCGAA AAGCCAGTGG TCGCGCGAAA 
GCGGTGCAGC TGTTTACCTA CGGTGGTCGT AGTGTCCCCA TTTGGTGGAA ACAGAATCAA 
GCAGCATTAG AGCGCTATAA AAATTTGAAA GTATGGAATA TTGCCGAAGA GTCGGTGACT 
GCGATGGAGG CGTTAGTGAG CCGGACTATG TCGCTGCAAG TGTCCATCAG TGAAGGGCAG 
GTTTGGCTAT CTGACAATGA GCACAGTGTG TTGATTGAGC CTGAAATACT TAAAGATTAT 
CAATAA
 
Protein sequence
MALKATVFKV NLQIADMDRG YYQDHQLTLA QHPSETDGRM MVRLLAFILN ASETLSFTKG 
LCVDDEPELW DKSLSGEVDL WIEFGQADEK WLRKASGRAK AVQLFTYGGR SVPIWWKQNQ 
AALERYKNLK VWNIAEESVT AMEALVSRTM SLQVSISEGQ VWLSDNEHSV LIEPEILKDY 
Q