| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SO_3105 |
|---|
| Symbol | pspE-1 |
|---|
| ID | 1170794 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella oneidensis MR-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_004347 |
|---|
| Strand | + |
|---|
| Start bp | 3232563 |
|---|
| End bp | 3232961 |
|---|
| Gene Length | 399 bp |
|---|
| Protein Length | 132 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637344910 |
|---|
| Product | phage shock protein E |
|---|
| Protein accession | NP_718667 |
|---|
| Protein GI | 24374624 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0607] Rhodanese-related sulfurtransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGTTCAACA AGTTACTGTT TGGCAGTAAA AAATTACTTG GAGTCGCCCT ATTGAGTCTA
TTCTCACTCT CGATAGTACC TCATGAGGCA AATGCAGCCG ATCAACAACC TCAAGTTGCA
TGGGAAAAAA TCGCCTCAGG CGCGATGGTG CTCGATGTCA GAACGCCAGA GGAATTTGCA
GCGGGACATT TAGTTAATGC TGTCAATATA CCCTTTGAAC AAGTGGCCGC AGAGTTTGCT
AAACGTGGGA TAGCCAAGGA TACACCCGTA GTCTTGTATT GCCGCAGTGG CAGACGCAGT
GGTATTGCCA CCGACGCCTT AGTTGCAGCA GGTTATACCA AAACCTACAA CGGTGGAGGC
TATCAAACCT TAGCCGAGAC CCAGCCCAAA ACAGAATAA
|
|---|
| Protein sequence | MFNKLLFGSK KLLGVALLSL FSLSIVPHEA NAADQQPQVA WEKIASGAMV LDVRTPEEFA
AGHLVNAVNI PFEQVAAEFA KRGIAKDTPV VLYCRSGRRS GIATDALVAA GYTKTYNGGG
YQTLAETQPK TE
|
|---|
| |