Gene SO_3101 details

Gene Information

• Locus tag: SO_3101
• ID: 1170790
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella oneidensis MR-1
• Kingdom: Bacteria
• Replicon accession: NC_004347
• Strand: +
• Start bp: 3227065
• End bp: 3227781
• Gene Length: 717 bp
• Protein Length: 238 aa
• Translation table: 11
• GC content: 44%
• IMG OID: 637344906
• Product: hypothetical protein
• Protein accession: NP_718663
• Protein GI: 24374620
• COG category: [S] Function unknown
• COG ID: [COG2859] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAACGCA ATTATCTACT TTCCGCCATC GTGCTCGGTG GTTTTTTATG TGCAGGCATG 
GTTTATGTTG GACAGAGCGC CAACTCAGCG TTATTGGAAA TGAAAGCGCT TGAGCGCACC 
GTCACAGTGA AAGGCCTTGC GGAAAAAGAA GTCAAAGCCA ATATCGCCAT CTGGCCGATT 
AACTTTACCG AAGTCGACAA CAACCTACCC AAGCTTTATG AAACCGTACA ACTAAAAACC 
GACAAAGTAG TCGCTTTCCT TAAAGAGCGC GGCTTTAGCG ACAGTGAAAT TACCATTTCG 
CTACCATCAA TTGAAGACCG GCAGGCTCAA GGTTATGTCG ACCCCAATGT AAAATATCGA 
TATTCGGCAA AGGTGAATCT CTCTGTCTAT ACCTCACAGA TTGACTTAAT GCTAAGTTCA 
CGTAAGCAAA TGATTAATTT GGTTAAAGAA GGCATTGCTA TCGCCAGCCA AGACTATGAA 
AACCGCACTG AGTTTTTATT TACTCAGCTC AATGACGTCA AACCGACTAT GGTGCAAGAA 
GCCACTCAAA ATGCGCGTGA AGTGGCGGAA AAGTTCGCCA AAGACTCAGA ATCCCGTCTA 
GGGAAAATTA AGAGTGCCAG CCAAGGCCAG TTCACGATTT CAGACCGCGA TAGCAGCACG 
CCATATATCA AACAAATTCG CATTGTGTCG ACGCTGACCT ATTATTTAAA CGACTAA 

 

Protein sequence

MQRNYLLSAI VLGGFLCAGM VYVGQSANSA LLEMKALERT VTVKGLAEKE VKANIAIWPI 
NFTEVDNNLP KLYETVQLKT DKVVAFLKER GFSDSEITIS LPSIEDRQAQ GYVDPNVKYR 
YSAKVNLSVY TSQIDLMLSS RKQMINLVKE GIAIASQDYE NRTEFLFTQL NDVKPTMVQE 
ATQNAREVAE KFAKDSESRL GKIKSASQGQ FTISDRDSST PYIKQIRIVS TLTYYLND